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Dataset Identifier

Metadata
datasetIdentifier	PASS00194
datasetType	MSMS
submitter	Alessandro Tanca <tanca@portocontericerche.it>
submitter_organization	Porto Conte Ricerche
lab_head_full_name	M. Filippa Addis, Sergio Uzzau
lab_head_email	addis@portocontericerche.it, uzzau@uniss.it
lab_head_organization	Porto Conte Ricerche
lab_head_country	Italy
datasetTag	metaproteome-DB
datasetTitle	Evaluating the impact of different sequence databases on metaproteome analysis: insights from a lab-assembled microbial mixture
publicReleaseDate	2014-01-01 00:00:00
finalizedDate	2014-02-18 09:08:07
summary
contributors	Alessandro Tanca, Antonio Palomba, Massimo Deligios, Tiziana Cubeddu, Cristina Fraumene, Grazia Biosa, Daniela Pagnozzi, Maria Filippa Addis, Sergio Uzzau
publication	Tanca A, Palomba A, Deligios M, Cubeddu T, Fraumene C, Biosa G, Pagnozzi D, Addis MF, Uzzau S. Evaluating the impact of different sequence databases on metaproteome analysis: insights from a lab-assembled microbial mixture. PLoS One. 2013 Dec 9;8(12):e82981.
growth
treatment
extraction
separation
digestion
acquisition
informatics
instruments	Thermo Scientific LTQ Orbitrap Velos
species	Microbial mixture
massModifications	static: C +57.02

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00194
To access files via FTP, use credentials:

Servername: ftp.peptideatlas.org
Username: PASS00194
Password: EG4564a

Or use your browser's FTP mode: ftp://PASS00194:EG4564a@ftp.peptideatlas.org/

Listing of files:

 1.2G Jan 23  2013 9MM_FASP.raw
 197K Sep 27  2013 9MM_FASP_chromatogram.tif
 1.2G Jan 23  2013 9MM_PPID.raw
 208K Sep 27  2013 9MM_PPID_chromatogram.tif
  30M Jan 23  2013 Meta-6FT.fasta
 5.4M Jan 23  2013 Meta-PA.fasta
  749 Jan 23  2013 PASS00194_DESCRIPTION-2013-00-23_030812.txt
  712 Jan 23  2013 PASS00194_DESCRIPTION-2013-00-23_051223.txt
  908 Sep 27  2013 PASS00194_DESCRIPTION-2013-08-27_075754.txt
 1.1K Feb 18  2014 PASS00194_DESCRIPTION-2014-01-18_090526.txt
 1.3K Feb 18  2014 PASS00194_DESCRIPTION-2014-01-18_090658.txt
 1.6K Feb 18  2014 PASS00194_DESCRIPTION-2014-01-18_090747.txt
 1.1K Feb 18  2014 PASS00194_DESCRIPTION.txt
  98M Jan 23  2013 SGA-6FT.fasta
  16M Jan 23  2013 SGA-PA.fasta
 156K Jan 23  2013 Search parameters all files.docx
 1.3M Jan 23  2013 peptides_NCBI-BFV.xlsx
 1.4M Jan 23  2013 peptides_NCBI-G.xlsx
 1.4M Jan 23  2013 peptides_NCBI-S.xlsx
 825K Jan 23  2013 peptides_SP-BFV.xlsx
 808K Jan 23  2013 peptides_SP-G.xlsx
 784K Jan 23  2013 peptides_SP-S.xlsx
 1.2M Jan 23  2013 peptides_TrEMBL-BFV.xlsx
 1.4M Jan 23  2013 peptides_TrEMBL-G.xlsx
 1.3M Jan 23  2013 peptides_TrEMBL-S.xlsx
 7.7M Jan 23  2013 peptides_all_DBs.xlsx
 6.6M Jan 23  2013 peptides_all_DBs_no_6FT.xlsx
 177K Jan 23  2013 proteins_Meta-PA.xlsx
 295K Jan 23  2013 proteins_NCBI-G.xlsx
 280K Jan 23  2013 proteins_NCBI-S.xlsx
 338K Jan 23  2013 proteins_SGA-PA.xlsx
 246K Jan 23  2013 proteins_SP-BFV.xlsx
 196K Jan 23  2013 proteins_SP-G.xlsx
 184K Jan 23  2013 proteins_SP-S.xlsx
 335K Jan 23  2013 proteins_TrEMBL-BFV.xlsx
 306K Jan 23  2013 proteins_TrEMBL-G.xlsx
 290K Jan 23  2013 proteins_TrEMBL-S.xlsx
  55K Jan 23  2013 proteins_all_DBs_no_6FT.xlsx

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