≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS00294
datasetTypeMSMS
submitterJoshua Aldrich <joshua.aldrich@pnnl.gov>
submitter_organization
lab_head_full_name
lab_head_email
lab_head_organization
lab_head_country
datasetTagEnterobacter_Lignin
datasetTitlelignin_degradation_Enterobacter_lignolyticus
publicReleaseDate2013-08-08 00:00:00
finalizedDate2013-08-09 09:39:55
summary
contributorsK.M. DeAngelis,
D. Sharma,
R. Varney,
B.A. Simmons,
N.G. Isern,
L. Markillie,
C.D. Nicora,
A.D. Norbeck,
R.C. Taylor,
J. Aldrich,
E.W. Robinson
publicationEvidence of dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1
growth
treatment
extraction
separation
digestion
acquisition
informatics
instrumentsThermo Velos Orbitrap
speciesEnterobacter lignolyticus
massModificationsvariable: M+15.9949

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00294
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00294
Password: XT7478ukh

Or use your browser's FTP mode: ftp://PASS00294:XT7478ukh@ftp.peptideatlas.org/


Listing of files:

 361M Aug  8  2013 E_ligno_SCF1_LX_pool_01_01Oct11_Lynx_11-09-28.raw
 354M Aug  8  2013 E_ligno_SCF1_LX_pool_02_01Oct11_Lynx_11-08-11.raw
 348M Aug  8  2013 E_ligno_SCF1_LX_pool_03_01Oct11_Lynx_11-09-28.raw
 400M Aug  8  2013 E_ligno_SCF1_LX_pool_04_01Oct11_Lynx_11-08-11.raw
 422M Aug  8  2013 E_ligno_SCF1_LX_pool_05_01Oct11_Lynx_11-09-28.raw
 422M Aug  8  2013 E_ligno_SCF1_LX_pool_06_01Oct11_Lynx_11-08-11.raw
 430M Aug  8  2013 E_ligno_SCF1_LX_pool_07_01Oct11_Lynx_11-09-28.raw
 439M Aug  8  2013 E_ligno_SCF1_LX_pool_08_01Oct11_Lynx_11-08-11.raw
 434M Aug  8  2013 E_ligno_SCF1_LX_pool_09_01Oct11_Lynx_11-09-28.raw
 442M Aug  8  2013 E_ligno_SCF1_LX_pool_10_01Oct11_Lynx_11-08-11.raw
 438M Aug  8  2013 E_ligno_SCF1_LX_pool_11_01Oct11_Lynx_11-09-28.raw
 441M Aug  8  2013 E_ligno_SCF1_LX_pool_12_01Oct11_Lynx_11-08-11.raw
 425M Aug  8  2013 E_ligno_SCF1_LX_pool_13_01Oct11_Lynx_11-09-28.raw
 432M Aug  8  2013 E_ligno_SCF1_LX_pool_14_01Oct11_Lynx_11-08-11.raw
 407M Aug  8  2013 E_ligno_SCF1_LX_pool_15_01Oct11_Lynx_11-09-28.raw
 1.7G Aug  8  2013 E_ligno_SCF1_L_01_Run1_3Nov11_Earth_11-07-26.raw
 1.8G Aug  8  2013 E_ligno_SCF1_L_01_Run2_3Nov11_Earth_11-07-26.raw
 1.6G Aug  8  2013 E_ligno_SCF1_L_01_Run3_11Nov11_Earth_11-07-26.raw
 1.6G Aug  8  2013 E_ligno_SCF1_L_02_Run1_3Nov11_Earth_11-07-26.raw
 1.7G Aug  8  2013 E_ligno_SCF1_L_02_Run2_3Nov11_Earth_11-07-26.raw
 1.7G Aug  8  2013 E_ligno_SCF1_L_02_Run3_11Nov11_Earth_11-07-26.raw
 1.7G Aug  8  2013 E_ligno_SCF1_L_03_Run1_3Nov11_Earth_11-07-26.raw
 1.6G Aug  8  2013 E_ligno_SCF1_L_03_Run2_11Nov11_Earth_11-07-26.raw
 1.6G Aug  8  2013 E_ligno_SCF1_L_03_Run3_11Nov11_Earth_11-07-26.raw
 592M Aug  8  2013 E_ligno_SCF1_L_sup_01_Run1_15Jun12_Earth_12-04-15.raw
 604M Aug  8  2013 E_ligno_SCF1_L_sup_01_Run2_15Jun12_Earth_12-04-15.raw
 628M Aug  8  2013 E_ligno_SCF1_L_sup_02_Run1_11Jun12_Earth_12-04-17.raw
 584M Aug  8  2013 E_ligno_SCF1_L_sup_02_Run2_14Jun12_Earth_12-04-17.raw
 535M Aug  8  2013 E_ligno_SCF1_L_sup_03_Run1_12Jun12_Earth_12-04-15.raw
 529M Aug  8  2013 E_ligno_SCF1_L_sup_03_Run2_14Jun12_Earth_12-04-17.raw
 1.3G Aug  8  2013 E_ligno_SCF1_X_01_Run1_1Nov11_Earth_11-07-26.raw
 1.9G Aug  8  2013 E_ligno_SCF1_X_01_Run1_2Nov11_Earth_11-07-26.raw
 1.9G Aug  8  2013 E_ligno_SCF1_X_01_Run2_11Nov11_Earth_11-07-26.raw
 1.9G Aug  8  2013 E_ligno_SCF1_X_01_Run3_11Nov11_Earth_11-07-26.raw
 1.9G Aug  8  2013 E_ligno_SCF1_X_02_Run1_3Nov11_Earth_11-07-26.raw
 2.0G Aug  8  2013 E_ligno_SCF1_X_02_Run2_11Nov11_Earth_11-07-26.raw
 2.1G Aug  8  2013 E_ligno_SCF1_X_02_Run3_11Nov11_Earth_11-07-26.raw
 1.8G Aug  8  2013 E_ligno_SCF1_X_03_Run1_3Nov11_Earth_11-07-26.raw
 1.9G Aug  8  2013 E_ligno_SCF1_X_03_Run2_11Nov11_Earth_11-07-26.raw
 1.9G Aug  8  2013 E_ligno_SCF1_X_03_Run3_11Nov11_Earth_11-07-26.raw
 570M Aug  8  2013 E_ligno_SCF1_X_sup_01_Run1_15Jun12_Earth_12-04-15.raw
 555M Aug  8  2013 E_ligno_SCF1_X_sup_01_Run2_15Jun12_Earth_12-04-17.raw
 623M Aug  8  2013 E_ligno_SCF1_X_sup_02_Run1_14Jun12_Earth_12-04-17.raw
 620M Aug  8  2013 E_ligno_SCF1_X_sup_02_Run2_15Jun12_Earth_12-04-17.raw
 675M Aug  8  2013 E_ligno_SCF1_X_sup_03_Run1_13Jun12_Earth_12-04-17.raw
 689M Aug  8  2013 E_ligno_SCF1_X_sup_03_Run2_15Jun12_Earth_12-04-17.raw
  610 Aug  8  2013 PASS00294_DESCRIPTION.txt

Browse FTP upload area