≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS00972
datasetTypeSRM
submitterKristoffer Sjöholm <kristoffer.sjoholm@immun.lth.se>
submitter_organizationLund University
lab_head_full_nameJohan Malmström
lab_head_emailjohan.malmstrom@med.lu.se
lab_head_organizationLund University
lab_head_countrySweden
datasetTagSurfaceDensityModel
datasetTitleRaw data for the manuscript: Targeted proteomics and absolute protein quantification for the construction of a stoichiometric host-pathogen surface density model
publicReleaseDate2017-02-09 00:00:00
finalizedDate2017-01-24 01:39:55
summaryCreation of a stoichiometric host-pathogen surface density model using absolute quantification with heavy peptides.
contributorsKristoffer Sjöholm
Ola Kilsgård
Johan Teleman
Lotta Happonen
Lars Malmström
Johan Malmström
publicationSjöholm, K., Kilsgård, O., Teleman, J., Happonen, L., Malmström, L. and Malmström, J.
growth
treatment
extraction
separation
digestion
acquisition
informaticsSkyline
instrumentsThermo Scientific TSQ Quantiva
speciesHuman and Streptococcus poyogenes
massModificationsStatic: C+57.021464,
variable: K+8.014199, R+10.008269, M+15.9949

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00972
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00972
Password: densitymod

Or use your browser's FTP mode: ftp://PASS00972:densitymod@ftp.peptideatlas.org/


Listing of files:

 4.1K Jan 24  2017 FileInfo.tsv
  65M Jan 24  2017 KristofferS_O1504_164.raw
  65M Jan 24  2017 KristofferS_O1504_165.raw
  65M Jan 24  2017 KristofferS_O1504_166.raw
  65M Jan 24  2017 KristofferS_O1504_167.raw
  65M Jan 24  2017 KristofferS_O1504_169.raw
  65M Jan 24  2017 KristofferS_O1504_170.raw
  65M Jan 24  2017 KristofferS_O1504_171.raw
  65M Jan 24  2017 KristofferS_O1504_172.raw
  65M Jan 24  2017 KristofferS_O1504_174.raw
  65M Jan 24  2017 KristofferS_O1504_175.raw
  65M Jan 24  2017 KristofferS_O1504_176.raw
  65M Jan 24  2017 KristofferS_O1504_177.raw
  65M Jan 24  2017 KristofferS_O1504_179.raw
  65M Jan 24  2017 KristofferS_O1504_180.raw
  65M Jan 24  2017 KristofferS_O1504_181.raw
  65M Jan 24  2017 KristofferS_O1504_182.raw
  65M Jan 24  2017 KristofferS_O1504_184.raw
  65M Jan 24  2017 KristofferS_O1504_185.raw
  65M Jan 24  2017 KristofferS_O1504_186.raw
  65M Jan 24  2017 KristofferS_O1504_187.raw
  65M Jan 24  2017 KristofferS_O1504_189.raw
  65M Jan 24  2017 KristofferS_O1504_190.raw
  65M Jan 24  2017 KristofferS_O1504_191.raw
  65M Jan 24  2017 KristofferS_O1504_192.raw
 110M Jan 24  2017 KristofferS_O1611_147.raw
 110M Jan 24  2017 KristofferS_O1611_148.raw
 109M Jan 24  2017 KristofferS_O1611_149.raw
 110M Jan 24  2017 KristofferS_O1611_150.raw
 110M Jan 24  2017 KristofferS_O1611_151.raw
 109M Jan 24  2017 KristofferS_O1611_152.raw
 109M Jan 24  2017 KristofferS_O1611_153.raw
 110M Jan 24  2017 KristofferS_O1611_154.raw
 109M Jan 24  2017 KristofferS_O1611_169.raw
 109M Jan 24  2017 KristofferS_O1611_170.raw
 109M Jan 24  2017 KristofferS_O1611_171.raw
 109M Jan 24  2017 KristofferS_O1611_172.raw
 109M Jan 24  2017 KristofferS_O1611_173.raw
 110M Jan 24  2017 KristofferS_O1611_174.raw
 110M Jan 24  2017 KristofferS_O1611_175.raw
 110M Jan 24  2017 KristofferS_O1611_176.raw
  846 Jan 24  2017 PASS00972_DESCRIPTION.txt
  98K Jan 24  2017 Transition_List.tsv

Browse FTP upload area