≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS01313
datasetTypeMSMS
submitterMichael Ward <wardlabnih@gmail.com>
submitter_organizationNIH/NINDS
lab_head_full_nameMichael Ward
lab_head_emailwardlabnih@gmail.com
lab_head_organizationNIH/NINDS
lab_head_countryUSA
datasetTaglamp1apex
datasetTitleRNA granules hitchhike on lysosomes for long-distance transport, utilizing Annexin A11 to tether RNA granules to lysosomes
publicReleaseDate2019-01-04 00:00:00
finalizedDate2018-12-27 15:00:50
summaryLamp1-Apex proteomics dataset using NES-Apex dataset as spatial control to identify lysosome specific interacting proteins in ipsa-neurons.
contributorsMichael Ward
publicationunpublished
growth
treatment
extraction
separation
digestion
acquisition
informatics
instrumentsThermo Scientific Q-Exactive HF
speciesHuman
massModificationsstatic: C+57.021464

variable: K+8.014199, M+10.008269

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS01313
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS01313
Password: ipsc123

Or use your browser's FTP mode: ftp://PASS01313:ipsc123@ftp.peptideatlas.org/


Listing of files:

 1.5G Dec 27  2018 20170819_Lamp1_APEX_WT_1.raw
 1.4G Dec 27  2018 20170819_Lamp1_APEX_WT_2.raw
 1.4G Dec 27  2018 20170819_Lamp1_APEX_WT_3.raw
 1.3G Dec 27  2018 20170819_Lamp1_APEX_WT_4.raw
 1.4G Dec 27  2018 20170819_NES_APEX_WT_1.raw
 1.4G Dec 27  2018 20170819_NES_APEX_WT_2.raw
 1.3G Dec 27  2018 20170819_NES_APEX_WT_3.raw
 1.3G Dec 27  2018 20170819_NES_APEX_WT_4.raw
 1.3M Dec 27  2018 Differential_Results after MSstats.txt
  479 Dec 26  2018 PASS01313_DESCRIPTION-2018-11-26_125018.txt
  622 Dec 26  2018 PASS01313_DESCRIPTION.txt

Browse FTP upload area