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PeptideAtlas Data Contributors

The PeptideAtlas team would like to thank all of the contributors who have made their data, both published and still unpublished, available to us for this project. For additional listings, please see repository.

Published Data

Name Cell Type Publication
Priska von Haller Human Jurkat T-cell lipid raft associated proteins von Haller et al. 2003, Mol Cell Proteomics, 2, 428
von Haller et al. 2003, Mol Cell Proteomics. 2003 Jul;2(7):426-7.
Phil Hardwidge,
Brett Finlay
Human Caco-2 intestinal epithelial cell line Hardwidge PR, et al. 2004 J Biol Chem., 279(19):20127-36.
Jeff Ranish Human Hela nuclear extract Himeda CL et al., 2004., Mol Cell Biol.;24(5):2132-43.
Michael Wright Human prostate cancer cell line: LNCaP (membrane) Wright ME et al. 2003. Genome Biol.;5(1):R4.
Wei Yan (ISB),
Michael G. Katze (UW),
Nelson Fausto (UW)
Human liver carcinoma cell line (Huh7 and HFH cells) Yan, W. et al. (2004) Genome Biology 2004, 5:R54;
Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
Mark Carlson (UT, Austin),
John Prince (UT),
R Wang (UT), P Lu (UT),
EM Marcotte (UT)
Human SiHa cell line and SqCC cell lines; Yeast cells (Sc) Prince et al. (2004) Nature Biotechnology, 22(4):471
Yuzuru Shiio(ISB), RN Eisenman RN (Fred Hutchinson Cancer Research Center), Sam Donohoe (ISB), DR Goodlett (Fred Hutchinson Cancer Research Center), Ruedi Aebersold (ISB) Chromatin-associated proteins in human B lymphocytes Shiio et al. (2003) J Am Soc Mass Spectrom. 2003 Jul;14(7):696-703.
Katherine Resing (Department of Chemistry and Biochemistry and Howard Hughes Medical Institute, University of Colorado), Meyer-Arendt K, Mendoza AM, Aveline-Wolf LD Jonscher KR, Pierce KG, Old WM, Cheung HT, Russell S, Wattawa JL, Goehle GR, Knight RD, Ahn NG. Human Erythroleukemia K562 cell line Resing et al., Anal Chem. 2004 Jul 1;76(13):3556-68.
Serikawa KA (UW), Xu XL (UW), MacKay VL (UW), Law GL (UW), Zong Q (UW), Zhao LP (UW), Bumgarner R (UW), Morris DR (UW) Yeast (Sc) budding yeast treated with mating hormone Serikawa KA, Xu XL, MacKay VL, Law GL, Zong Q, Zhao LP, Bumgarner R, Morris DR. Mol Cell Proteomics. 2003 Mar;2(3):191-204

Unpublished Data

Name Cell Type Related Publication
Biaoyang Lin,
Lee Hood
Human prostate cancer cell lines: LNCaP, CL-1; serum, ovarian cancer unpublished
Wei Yan (ISB),
Michael G. Katze (UW),
Nelson Fausto (UW)
Human Lymphoctyes, HCV cell line unpublished
Bernd Wollscheid (ISB),
Julian Watts (ISB),
David Rawlings (UW)
Human B-cell line, Human T cells unpublished
Michael Wright Human prostate cancer cell line: LNCaP unpublished
Hui Zhang Human blood unpublished
Kathleen Kennedy,
Alan Aderem
Human THP-1 cell line unpublished
Erich Brunner,
Floyd Kregenow
Drosophila S2 Scheider cells unpublished
Christopher Colangelo (Yale) et al.
Human NB4 cell cultures unpublished
Samuel Donohoe
Lynn Schnapp (UW/Harborview)
Human bronchoalveolar lavage fluid unpublished
Yuzuru Shiio
Human B cells unpublished
Dan Martin
Human Red Blood Cells, Human LNCaP media, Yeast (Sc), Human purified adducin protein unpublished
Rose Boyle,
Julian Watts,
Larry Samelson (Center for Cancer Research, National Cancer Institute, NIH),
Lihong Yang (North Shore Long Island Jewish Research Institute)
Human T Cells JCaM2.5 unpublished
Bernd Wollsch
Human T Cell RAfts unpublished
Jing Zhang (UW)
Human brain unpublished
Katherine Resing (Department of Chemistry and Biochemistry and Howard Hughes Medical Institute, University of Colorado), Meyer-Arendt K, Mendoza AM, Aveline-Wolf LD Jonscher KR, Pierce KG, Old WM, Cheung HT, Russell S, Wattawa JL, Goehle GR, Knight RD, Ahn NG. Human Erythroleukemia K562 cell line unpublished datasets
Jyoti Choudhary (Sanger Institute), Lu Yu
Human EK unpublished
Jeff Ranish
Yeast (Sc) unpublished
Mark Flory, Mingliang Ye, Brian Raught
Yeast (Sc) unpublished
Mark R. Flory (ISB), Hookeun Lee (ISB), Richard Bonneau (ISB), Parag Mallick (ISB), Kyle Serikawa (UW), David R. Morris (UW), & Ruedi Aebersold (ISB) Yeast (Sc) translation state array analysis of budding yeast cell cycle Mark R. Flory, Hookeun Lee, Richard Bonneau, Parag Mallick, Kyle Serikawa, David R. Morris, & Ruedi Aebersold, 2005, (submitted)
Jeff Ranish
Yeast (Sc) unpublished
Sacha Baginsky (ETH, Zurich)
arabidopsis thaliana unpublished
Nitin Baliga
Halobacterium unpublished
Richard Unwin (University of Manchester) & Tony Whetton (UMIST)
Mus musculus bone marrow unpublished
Marco Toigo
Mus musculus muscle unpublished
Daciana Margineantu (UW), Sam Donohoe Human Colo-205 cells unpublished

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