PeptideAtlas
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RAW DATA AVAILABLE FOR DOWNLOAD

It is our policy to make publicly available for download as much of the raw data we use to build the PeptideAtlas as possible. This includes datasets that have been previously published or otherwise released by the data producers. If you download and use these data in a published work, please cite the associated article (or data contributors if unpublished); an acknowledgement of the PeptideAtlas repository would also be appreciated. There are also many unpublished raw datasets used to build the PeptideAtlas, and these are not made available for download until publication or release by the producers.

FILTERING THE TABLE

You can use the row above the orange row to filter and limit the data displayed within the table. Just type or select the search terms in the box above each column, and hit enter, the table will be filtered according to all filter terms you entered. Click "reset" on the up right corner of the table to clear all the texts in the first row.

If you need help, please write to us with our feedback page on the navigation bar.

There are 615 experimental datasets available for download (Dec 17 12:28:20 PDT 2010)


Sample Accession Name Organism Resources Description Data Contributors Related Publications
PAe001182 Dissections_DMuc_B1T1 Honeybee Search_Results(13.459 MB)
ProteinProphet_file(508.555 KB)

README
Dissections_DMuc_B1T1 Leonard Foster
PAe001205 Dissections_DMuc_B2T1 Honeybee Search_Results(9.132 MB)
ProteinProphet_file(305.541 KB)

README
Dissections_DMuc_B2T1 Leonard Foster
PAe001226 Dissections_DMuc_B3T1 Honeybee Search_Results(6.095 MB)
ProteinProphet_file(161.740 KB)

README
Dissections_DMuc_B3T1 Leonard Foster
PAe001164 Dissections_DTst_B1T1 Honeybee Search_Results(22.268 MB)
ProteinProphet_file(660.077 KB)

README
Dissections_DTst_B1T1 Leonard Foster
PAe001216 Dissections_DTst_B2T1 Honeybee Search_Results(20.083 MB)
ProteinProphet_file(570.240 KB)

README
Dissections_DTst_B2T1 Leonard Foster
PAe001193 Dissections_DTst_B3T1 Honeybee Search_Results(19.655 MB)
ProteinProphet_file(540.929 KB)

README
Dissections_DTst_B3T1 Leonard Foster
PAe001222 Dissections_DvW_AntL_B1T1 Honeybee Search_Results(13.687 MB)
ProteinProphet_file(451.337 KB)

README
Dissections_DvW_AntL_B1T1 Leonard Foster
PAe001188 Dissections_DvW_AntL_B1T2 Honeybee Search_Results(1.630 MB)
ProteinProphet_file(68.853 KB)

README
Dissections_DvW_AntL_B1T2 Leonard Foster
PAe001266 Dissections_DvW_AntL_B2T1 Honeybee Search_Results(20.847 MB)
ProteinProphet_file(560.190 KB)

README
Dissections_DvW_AntL_B2T1 Leonard Foster
PAe001251 Dissections_DvW_AntR_B1T1 Honeybee Search_Results(13.942 MB)
ProteinProphet_file(418.031 KB)

README
Dissections_DvW_AntR_B1T1 Leonard Foster
PAe001186 Dissections_DvW_AntR_B2T1 Honeybee Search_Results(13.978 MB)
ProteinProphet_file(431.656 KB)

README
Dissections_DvW_AntR_B2T1 Leonard Foster
PAe001156 Dissections_DvW_AntS_B3T1 Honeybee Search_Results(1.072 MB)
ProteinProphet_file(61.000 KB)

README
Dissections_DvW_AntS_B3T1 Leonard Foster
PAe001232 Dissections_DvW_Brn_B1T1 Honeybee Search_Results(6.695 MB)
ProteinProphet_file(119.952 KB)

README
Dissections_DvW_Brn_B1T1 Leonard Foster
PAe001150 Dissections_DvW_Brn_B3T1 Honeybee Search_Results(5.723 MB)
ProteinProphet_file(85.156 KB)

README
Dissections_DvW_Brn_B3T1 Leonard Foster
PAe001224 Dissections_DvW_Crp_B1T1 Honeybee Search_Results(12.984 MB)
ProteinProphet_file(175.708 KB)

README
Dissections_DvW_Crp_B1T1 Leonard Foster
PAe001207 Dissections_DvW_Crp_B1T2 Honeybee Search_Results(2.074 MB)
ProteinProphet_file(66.823 KB)

README
Dissections_DvW_Crp_B1T2 Leonard Foster
PAe001217 Dissections_DvW_Crp_B2T1 Honeybee Search_Results(3.085 MB)
ProteinProphet_file(110.495 KB)

README
Dissections_DvW_Crp_B2T1 Leonard Foster
PAe001143 Dissections_DvW_Crp_B3T1 Honeybee Search_Results(23.759 MB)
ProteinProphet_file(453.616 KB)

README
Dissections_DvW_Crp_B3T1 Leonard Foster
PAe001229 Dissections_DvW_Eye_B1T1 Honeybee Search_Results(4.532 MB)
ProteinProphet_file(62.254 KB)

README
Dissections_DvW_Eye_B1T1 Leonard Foster
PAe001147 Dissections_DvW_Eye_B2T1 Honeybee Search_Results(4.547 MB)
ProteinProphet_file(63.702 KB)

README
Dissections_DvW_Eye_B2T1 Leonard Foster
PAe001265 Dissections_DvW_Int_B1T1 Honeybee Search_Results(20.736 MB)
ProteinProphet_file(384.030 KB)

README
Dissections_DvW_Int_B1T1 Leonard Foster
PAe001262 Dissections_DvW_Int_B2T1 Honeybee Search_Results(19.007 MB)
ProteinProphet_file(372.503 KB)

README
Dissections_DvW_Int_B2T1 Leonard Foster
PAe001149 Dissections_DvW_Int_B3T1 Honeybee Search_Results(11.582 MB)
ProteinProphet_file(208.739 KB)

README
Dissections_DvW_Int_B3T1 Leonard Foster
PAe001233 Dissections_DvW_LegF_B1T1 Honeybee Search_Results(8.089 MB)
ProteinProphet_file(315.926 KB)

README
Dissections_DvW_LegF_B1T1 Leonard Foster
PAe001246 Dissections_DvW_LegF_B2T1 Honeybee Search_Results(6.139 MB)
ProteinProphet_file(237.926 KB)

README
Dissections_DvW_LegF_B2T1 Leonard Foster
PAe001268 Dissections_DvW_LegF_B3T1 Honeybee Search_Results(10.821 MB)
ProteinProphet_file(355.641 KB)

README
Dissections_DvW_LegF_B3T1 Leonard Foster
PAe001194 Dissections_DvW_LegM_B1T1 Honeybee Search_Results(7.404 MB)
ProteinProphet_file(322.326 KB)

README
Dissections_DvW_LegM_B1T1 Leonard Foster
PAe001230 Dissections_DvW_LegM_B2T1 Honeybee Search_Results(8.811 MB)
ProteinProphet_file(294.908 KB)

README
Dissections_DvW_LegM_B2T1 Leonard Foster
PAe001167 Dissections_DvW_LegM_B3T1 Honeybee Search_Results(12.110 MB)
ProteinProphet_file(396.303 KB)

README
Dissections_DvW_LegM_B3T1 Leonard Foster
PAe001195 Dissections_DvW_LegR_B1T1 Honeybee Search_Results(10.193 MB)
ProteinProphet_file(376.874 KB)

README
Dissections_DvW_LegR_B1T1 Leonard Foster
PAe001220 Dissections_DvW_LegR_B2T1 Honeybee Search_Results(10.251 MB)
ProteinProphet_file(368.808 KB)

README
Dissections_DvW_LegR_B2T1 Leonard Foster
PAe001146 Dissections_DvW_LegR_B3T1 Honeybee Search_Results(9.551 MB)
ProteinProphet_file(355.119 KB)

README
Dissections_DvW_LegR_B3T1 Leonard Foster
PAe001199 Dissections_DvW_Man_B2T1 Honeybee Search_Results(5.770 MB)
ProteinProphet_file(167.743 KB)

README
Dissections_DvW_Man_B2T1 Leonard Foster
PAe001254 Dissections_DvW_Man_B3T1 Honeybee Search_Results(4.639 MB)
ProteinProphet_file(90.143 KB)

README
Dissections_DvW_Man_B3T1 Leonard Foster
PAe001208 Dissections_DvW_Oce_B1T1 Honeybee Search_Results(3.424 MB)
ProteinProphet_file(18.677 KB)

README
Dissections_DvW_Oce_B1T1 Leonard Foster
PAe001261 Dissections_DvW_Oce_B2T1 Honeybee Search_Results(4.055 MB)
ProteinProphet_file(42.702 KB)

README
Dissections_DvW_Oce_B2T1 Leonard Foster
PAe001237 Dissections_DvW_Rec_B1T1 Honeybee Search_Results(9.170 MB)
ProteinProphet_file(216.501 KB)

README
Dissections_DvW_Rec_B1T1 Leonard Foster
PAe001176 Dissections_DvW_Rec_B2T1 Honeybee Search_Results(2.095 MB)
ProteinProphet_file(61.262 KB)

README
Dissections_DvW_Rec_B2T1 Leonard Foster
PAe001161 Dissections_DvW_Rec_B3T1 Honeybee Search_Results(14.856 MB)
ProteinProphet_file(202.329 KB)

README
Dissections_DvW_Rec_B3T1 Leonard Foster
PAe001187 Dissections_DvW_Slc_B1T1 Honeybee Search_Results(3.200 MB)
ProteinProphet_file(150.920 KB)

README
Dissections_DvW_Slc_B1T1 Leonard Foster
PAe001276 Dissections_DvW_Slc_B2T1 Honeybee Search_Results(4.103 MB)
ProteinProphet_file(205.180 KB)

README
Dissections_DvW_Slc_B2T1 Leonard Foster
PAe001225 Dissections_DvW_Slt_B1T1 Honeybee Search_Results(17.936 MB)
ProteinProphet_file(511.017 KB)

README
Dissections_DvW_Slt_B1T1 Leonard Foster
PAe001292 Dissections_DvW_Ven_B1T1 Honeybee Search_Results(11.925 MB)
ProteinProphet_file(274.956 KB)

README
Dissections_DvW_Ven_B1T1 Leonard Foster
PAe001322 Dissections_DvW_Ven_B2T1 Honeybee Search_Results(7.150 MB)
ProteinProphet_file(155.353 KB)

README
Dissections_DvW_Ven_B2T1 Leonard Foster
PAe001298 Dissections_DvW_Ven_B3T1 Honeybee Search_Results(6.086 MB)
ProteinProphet_file(95.701 KB)

README
Dissections_DvW_Ven_B3T1 Leonard Foster
PAe001326 Dissections_DvW_Wng_B1T1 Honeybee Search_Results(4.243 MB)
ProteinProphet_file(65.084 KB)

README
Dissections_DvW_Wng_B1T1 Leonard Foster
PAe001303 Dissections_DvW_Wng_B2T1 Honeybee Search_Results(2.424 MB)
ProteinProphet_file(21.116 KB)

README
Dissections_DvW_Wng_B2T1 Leonard Foster
PAe001260 Dissections_Egg_B1T1 Honeybee mzXML_format(256.156 MB)
RAW_format(778.114 MB)

Search_Results(28.726 MB)

ProteinProphet_file(494.387 KB)

README
Dissections_Egg_B1T1 Leonard Foster
PAe001180 Dissections_Pol_B1T1 Honeybee mzXML_format(135.408 MB)
RAW_format(415.342 MB)

Search_Results(9.430 MB)

ProteinProphet_file(219.792 KB)

README
Dissections_Pol_B1T1 Leonard Foster
PAe001248 Dissections_QSph_B1T1 Honeybee Search_Results(3.980 MB)
ProteinProphet_file(78.821 KB)

README
Dissections_QSph_B1T1 Leonard Foster
PAe001201 Dissections_QSph_B2T1 Honeybee Search_Results(3.737 MB)
ProteinProphet_file(57.354 KB)

README
Dissections_QSph_B2T1 Leonard Foster
PAe001253 Dissections_QSph_B3T1 Honeybee Search_Results(1.739 MB)
ProteinProphet_file(20.858 KB)

README
Dissections_QSph_B3T1 Leonard Foster
PAe001329 Dissections_QvW_AntR_B1T1 Honeybee Search_Results(4.673 MB)
ProteinProphet_file(105.526 KB)

README
Dissections_QvW_AntR_B1T1 Leonard Foster
PAe001257 Dissections_QvW_AntR_B2T1 Honeybee Search_Results(4.605 MB)
ProteinProphet_file(93.539 KB)

README
Dissections_QvW_AntR_B2T1 Leonard Foster
PAe001184 Dissections_QvW_AntS_B3T1 Honeybee Search_Results(1.468 MB)
ProteinProphet_file(119.540 KB)

README
Dissections_QvW_AntS_B3T1 Leonard Foster
PAe001139 Dissections_QvW_Brn_B1T1 Honeybee Search_Results(5.632 MB)
ProteinProphet_file(95.376 KB)

README
Dissections_QvW_Brn_B1T1 Leonard Foster
PAe001213 Dissections_QvW_Brn_B1T2 Honeybee Search_Results(9.429 MB)
ProteinProphet_file(194.425 KB)

README
Dissections_QvW_Brn_B1T2 Leonard Foster
PAe001191 Dissections_QvW_Brn_B2T1 Honeybee Search_Results(7.292 MB)
ProteinProphet_file(153.640 KB)

README
Dissections_QvW_Brn_B2T1 Leonard Foster
PAe001219 Dissections_QvW_Brn_B2T2 Honeybee Search_Results(8.418 MB)
ProteinProphet_file(149.967 KB)

README
Dissections_QvW_Brn_B2T2 Leonard Foster
PAe001171 Dissections_QvW_Brn_B3T1 Honeybee Search_Results(5.297 MB)
ProteinProphet_file(93.281 KB)

README
Dissections_QvW_Brn_B3T1 Leonard Foster
PAe001236 Dissections_QvW_Brn_B3T2 Honeybee Search_Results(10.441 MB)
ProteinProphet_file(181.155 KB)

README
Dissections_QvW_Brn_B3T2 Leonard Foster
PAe001227 Dissections_QvW_Crp_B1T1 Honeybee Search_Results(2.346 MB)
ProteinProphet_file(74.923 KB)

README
Dissections_QvW_Crp_B1T1 Leonard Foster
PAe001157 Dissections_QvW_Crp_B2T1 Honeybee Search_Results(2.771 MB)
ProteinProphet_file(113.419 KB)

README
Dissections_QvW_Crp_B2T1 Leonard Foster
PAe001244 Dissections_QvW_Eye_B1T1 Honeybee Search_Results(4.154 MB)
ProteinProphet_file(46.312 KB)

README
Dissections_QvW_Eye_B1T1 Leonard Foster
PAe001170 Dissections_QvW_Eye_B2T1 Honeybee Search_Results(4.321 MB)
ProteinProphet_file(41.504 KB)

README
Dissections_QvW_Eye_B2T1 Leonard Foster
PAe001144 Dissections_QvW_Int_B1T1 Honeybee Search_Results(19.719 MB)
ProteinProphet_file(341.841 KB)

README
Dissections_QvW_Int_B1T1 Leonard Foster
PAe001267 Dissections_QvW_Int_B2T1 Honeybee Search_Results(18.455 MB)
ProteinProphet_file(307.147 KB)

README
Dissections_QvW_Int_B2T1 Leonard Foster
PAe001148 Dissections_QvW_LegF_B1T1 Honeybee Search_Results(6.458 MB)
ProteinProphet_file(240.321 KB)

README
Dissections_QvW_LegF_B1T1 Leonard Foster
PAe001223 Dissections_QvW_LegF_B2T1 Honeybee Search_Results(10.532 MB)
ProteinProphet_file(421.331 KB)

README
Dissections_QvW_LegF_B2T1 Leonard Foster
PAe001200 Dissections_QvW_LegF_B3T1 Honeybee Search_Results(7.399 MB)
ProteinProphet_file(290.651 KB)

README
Dissections_QvW_LegF_B3T1 Leonard Foster
PAe001252 Dissections_QvW_LegM_B1T1 Honeybee Search_Results(6.153 MB)
ProteinProphet_file(208.489 KB)

README
Dissections_QvW_LegM_B1T1 Leonard Foster
PAe001190 Dissections_QvW_LegM_B2T1 Honeybee Search_Results(8.876 MB)
ProteinProphet_file(312.473 KB)

README
Dissections_QvW_LegM_B2T1 Leonard Foster
PAe001221 Dissections_QvW_LegM_B3T1 Honeybee Search_Results(9.702 MB)
ProteinProphet_file(327.699 KB)

README
Dissections_QvW_LegM_B3T1 Leonard Foster
PAe001183 Dissections_QvW_LegR_B1T1 Honeybee Search_Results(9.330 MB)
ProteinProphet_file(321.943 KB)

README
Dissections_QvW_LegR_B1T1 Leonard Foster
PAe001165 Dissections_QvW_LegR_B2T1 Honeybee Search_Results(9.666 MB)
ProteinProphet_file(317.443 KB)

README
Dissections_QvW_LegR_B2T1 Leonard Foster
PAe001247 Dissections_QvW_LegR_B3T1 Honeybee Search_Results(15.139 MB)
ProteinProphet_file(190.542 KB)

README
Dissections_QvW_LegR_B3T1 Leonard Foster
PAe001212 Dissections_QvW_Man_B1T1 Honeybee Search_Results(1.242 MB)
ProteinProphet_file(52.562 KB)

README
Dissections_QvW_Man_B1T1 Leonard Foster
PAe001206 Dissections_QvW_Man_B2T1 Honeybee Search_Results(4.443 MB)
ProteinProphet_file(145.269 KB)

README
Dissections_QvW_Man_B2T1 Leonard Foster
PAe001273 Dissections_QvW_Man_B3T1 Honeybee Search_Results(9.517 MB)
ProteinProphet_file(152.407 KB)

README
Dissections_QvW_Man_B3T1 Leonard Foster
PAe001198 Dissections_QvW_Oce_B1T1 Honeybee Search_Results(3.604 MB)
ProteinProphet_file(44.953 KB)

README
Dissections_QvW_Oce_B1T1 Leonard Foster
PAe001239 Dissections_QvW_Oce_B2T1 Honeybee Search_Results(4.457 MB)
ProteinProphet_file(113.877 KB)

README
Dissections_QvW_Oce_B2T1 Leonard Foster
PAe001243 Dissections_QvW_Poi_B1T1 Honeybee Search_Results(1.846 MB)
ProteinProphet_file(37.178 KB)

README
Dissections_QvW_Poi_B1T1 Leonard Foster
PAe001249 Dissections_QvW_Poi_B2T1 Honeybee Search_Results(3.483 MB)
ProteinProphet_file(88.328 KB)

README
Dissections_QvW_Poi_B2T1 Leonard Foster
PAe001173 Dissections_QvW_Poi_B3T1 Honeybee Search_Results(771.253 KB)
ProteinProphet_file(15.295 KB)

README
Dissections_QvW_Poi_B3T1 Leonard Foster
PAe001258 Dissections_QvW_Rec_B1T1 Honeybee Search_Results(10.952 MB)
ProteinProphet_file(266.552 KB)

README
Dissections_QvW_Rec_B1T1 Leonard Foster
PAe001142 Dissections_QvW_Rec_B2T1 Honeybee Search_Results(2.288 MB)
ProteinProphet_file(68.511 KB)

README
Dissections_QvW_Rec_B2T1 Leonard Foster
PAe001215 Dissections_QvW_Slc_B1T1 Honeybee Search_Results(2.884 MB)
ProteinProphet_file(113.698 KB)

README
Dissections_QvW_Slc_B1T1 Leonard Foster
PAe001154 Dissections_QvW_Slc_B2T1 Honeybee Search_Results(4.293 MB)
ProteinProphet_file(190.028 KB)

README
Dissections_QvW_Slc_B2T1 Leonard Foster
PAe001231 Dissections_QvW_Slt_B1T1 Honeybee Search_Results(17.327 MB)
ProteinProphet_file(497.792 KB)

README
Dissections_QvW_Slt_B1T1 Leonard Foster
PAe001185 Dissections_QvW_Stn_B1T1 Honeybee Search_Results(2.191 MB)
ProteinProphet_file(103.922 KB)

README
Dissections_QvW_Stn_B1T1 Leonard Foster
PAe001271 Dissections_QvW_Stn_B2T1 Honeybee Search_Results(4.135 MB)
ProteinProphet_file(108.442 KB)

README
Dissections_QvW_Stn_B2T1 Leonard Foster
PAe001204 Dissections_QvW_Stn_B3T1 Honeybee Search_Results(1.517 MB)
ProteinProphet_file(47.207 KB)

README
Dissections_QvW_Stn_B3T1 Leonard Foster
PAe001214 Dissections_QvW_Ter_B2T1 Honeybee Search_Results(1.510 MB)
ProteinProphet_file(30.148 KB)

README
Dissections_QvW_Ter_B2T1 Leonard Foster
PAe001175 Dissections_QvW_Ter_B3T1 Honeybee Search_Results(1.267 MB)
ProteinProphet_file(24.174 KB)

README
Dissections_QvW_Ter_B3T1 Leonard Foster
PAe001310 Dissections_QvW_Ven_B1T1 Honeybee Search_Results(13.831 MB)
ProteinProphet_file(314.663 KB)

README
Dissections_QvW_Ven_B1T1 Leonard Foster
PAe001328 Dissections_QvW_Ven_B2T1 Honeybee Search_Results(8.344 MB)
ProteinProphet_file(195.167 KB)

README
Dissections_QvW_Ven_B2T1 Leonard Foster
PAe001306 Dissections_QvW_Ven_B3T1 Honeybee Search_Results(4.593 MB)
ProteinProphet_file(45.451 KB)

README
Dissections_QvW_Ven_B3T1 Leonard Foster
PAe001160 Dissections_WAntSvAntF_B1T1 Honeybee mzXML_format(341.235 MB)
RAW_format(1.098 GB)

Search_Results(35.157 MB)

ProteinProphet_file(760.454 KB)

README
Dissections_WAntSvAntF_B1T1 Leonard Foster
PAe001140 Hemolymph_Pl_LIvNorm_B1T1 Honeybee mzXML_format(245.785 MB)
RAW_format(800.921 MB)

Search_Results(13.185 MB)

ProteinProphet_file(877.600 KB)

README
Hemolymph_Pl_LIvNorm_B1T1 Leonard Foster
PAe001174 Hemolymph_Pl_LIvNorm_B1T2 Honeybee mzXML_format(248.963 MB)
RAW_format(811.303 MB)

Search_Results(12.767 MB)

ProteinProphet_file(856.039 KB)

README
Hemolymph_Pl_LIvNorm_B1T2 Leonard Foster
PAe001046 Hemolymph_Pl_LSIvNorm_B1T1 Honeybee mzXML_format(367.347 MB)
RAW_format(1.411 GB)

Search_Results(13.942 MB)

ProteinProphet_file(691.836 KB)

README
Hemolymph_Pl_LSIvNorm_B1T1 Leonard Foster
PAe001039 Hemolymph_Pl_LSIvNorm_B1T2 Honeybee mzXML_format(168.949 MB)
RAW_format(705.812 MB)

Search_Results(10.913 MB)

ProteinProphet_file(464.218 KB)

README
Hemolymph_Pl_LSIvNorm_B1T2 Leonard Foster
PAe001043 Hemolymph_Pl_LSIvNorm_B2T1 Honeybee mzXML_format(271.694 MB)
RAW_format(1.023 GB)

Search_Results(15.291 MB)

ProteinProphet_file(923.355 KB)

README
Hemolymph_Pl_LSIvNorm_B2T1 Leonard Foster
PAe001044 Hemolymph_Pl_LSIvNorm_B3T1 Honeybee mzXML_format(375.897 MB)
RAW_format(1.513 GB)

Search_Results(15.592 MB)

ProteinProphet_file(834.876 KB)

README
Hemolymph_Pl_LSIvNorm_B3T1 Leonard Foster
PAe001245 Hemolymph_Pl_NIvNorm_B1T1 Honeybee mzXML_format(631.633 MB)
RAW_format(2.113 GB)

Search_Results(32.375 MB)

ProteinProphet_file(1.179 MB)

README
Hemolymph_Pl_NIvNorm_B1T1 Leonard Foster
PAe001141 Hemolymph_Pl_NormC_B1T1 Honeybee mzXML_format(401.688 MB)
RAW_format(1.571 GB)

Search_Results(11.395 MB)

ProteinProphet_file(889.296 KB)

README
Hemolymph_Pl_NormC_B1T1 Leonard Foster
PAe001272 Hemolymph_Pl_PLSandSI_B1T1 Honeybee mzXML_format(849.799 MB)
RAW_format(3.138 GB)

Search_Results(19.062 MB)

ProteinProphet_file(867.506 KB)

README
Hemolymph_Pl_PLSandSI_B1T1 Leonard Foster
PAe001159 Hemolymph_Pl_PLSIvNorm_B1T1 Honeybee mzXML_format(532.869 MB)
RAW_format(2.145 GB)

Search_Results(16.261 MB)

ProteinProphet_file(713.968 KB)

README
Hemolymph_Pl_PLSIvNorm_B1T1 Leonard Foster
PAe001241 Hemolymph_Pl_PSIvNorm_B1T1 Honeybee mzXML_format(574.040 MB)
RAW_format(2.300 GB)

Search_Results(17.513 MB)

ProteinProphet_file(782.782 KB)

README
Hemolymph_Pl_PSIvNorm_B1T1 Leonard Foster
PAe001041 Hemolymph_Pl_ScIvNorm_B1T1 Honeybee mzXML_format(345.252 MB)
RAW_format(1.291 GB)

Search_Results(16.442 MB)

ProteinProphet_file(914.198 KB)

README
Hemolymph_Pl_ScIvNorm_B1T1 Leonard Foster
PAe001045 Hemolymph_Pl_ScIvNorm_B2T1 Honeybee mzXML_format(314.206 MB)
RAW_format(1.284 GB)

Search_Results(6.366 MB)

ProteinProphet_file(334.185 KB)

README
Hemolymph_Pl_ScIvNorm_B2T1 Leonard Foster
PAe001042 Hemolymph_Pl_ScIvNorm_B2T2 Honeybee mzXML_format(175.694 MB)
RAW_format(681.953 MB)

Search_Results(13.113 MB)

ProteinProphet_file(574.857 KB)

README
Hemolymph_Pl_ScIvNorm_B2T2 Leonard Foster
PAe001040 Hemolymph_Pl_ScIvNorm_B3T1 Honeybee mzXML_format(266.583 MB)
RAW_format(985.872 MB)

Search_Results(15.104 MB)

ProteinProphet_file(808.339 KB)

README
Hemolymph_Pl_ScIvNorm_B3T1 Leonard Foster
PAe001218 Hemolymph_Pl3d_NIvNorm_B1T1 Honeybee mzXML_format(285.139 MB)
RAW_format(880.971 MB)

Search_Results(16.374 MB)

ProteinProphet_file(382.454 KB)

README
Hemolymph_Pl3d_NIvNorm_B1T1 Leonard Foster
PAe001448 Martaantenna_BLK1 Honeybee mzXML_format(111.216 MB)
RAW_format(379.064 MB)

Search_Results(8.477 MB)

ProteinProphet_file(229.557 KB)

README
Martaantenna_BLK1 Leonard Foster
PAe001417 Martaantenna_BLK10 Honeybee mzXML_format(107.744 MB)
RAW_format(372.285 MB)

Search_Results(8.339 MB)

ProteinProphet_file(238.842 KB)

README
Martaantenna_BLK10 Leonard Foster
PAe001436 Martaantenna_BLK11 Honeybee mzXML_format(111.055 MB)
RAW_format(367.620 MB)

Search_Results(7.582 MB)

ProteinProphet_file(241.216 KB)

README
Martaantenna_BLK11 Leonard Foster
PAe001422 Martaantenna_BLK12 Honeybee mzXML_format(111.090 MB)
RAW_format(364.411 MB)

Search_Results(7.550 MB)

ProteinProphet_file(250.963 KB)

README
Martaantenna_BLK12 Leonard Foster
PAe001439 Martaantenna_BLK13 Honeybee mzXML_format(114.481 MB)
RAW_format(384.835 MB)

Search_Results(7.491 MB)

ProteinProphet_file(237.580 KB)

README
Martaantenna_BLK13 Leonard Foster
PAe001428 Martaantenna_BLK14 Honeybee mzXML_format(114.420 MB)
RAW_format(379.321 MB)

Search_Results(7.780 MB)

ProteinProphet_file(255.359 KB)

README
Martaantenna_BLK14 Leonard Foster
PAe001440 Martaantenna_BLK15 Honeybee mzXML_format(78.679 MB)
RAW_format(233.624 MB)

Search_Results(6.934 MB)

ProteinProphet_file(176.013 KB)

README
Martaantenna_BLK15 Leonard Foster
PAe001434 Martaantenna_BLK16 Honeybee mzXML_format(79.732 MB)
RAW_format(230.626 MB)

Search_Results(7.254 MB)

ProteinProphet_file(190.407 KB)

README
Martaantenna_BLK16 Leonard Foster
PAe001450 Martaantenna_BLK17 Honeybee mzXML_format(82.838 MB)
RAW_format(253.182 MB)

Search_Results(7.404 MB)

ProteinProphet_file(169.235 KB)

README
Martaantenna_BLK17 Leonard Foster
PAe001431 Martaantenna_BLK18 Honeybee mzXML_format(79.861 MB)
RAW_format(240.512 MB)

Search_Results(6.890 MB)

ProteinProphet_file(172.186 KB)

README
Martaantenna_BLK18 Leonard Foster
PAe001443 Martaantenna_BLK19 Honeybee mzXML_format(77.251 MB)
RAW_format(234.330 MB)

Search_Results(6.746 MB)

ProteinProphet_file(169.162 KB)

README
Martaantenna_BLK19 Leonard Foster
PAe001424 Martaantenna_BLK2 Honeybee mzXML_format(108.166 MB)
RAW_format(367.149 MB)

Search_Results(8.301 MB)

ProteinProphet_file(215.741 KB)

README
Martaantenna_BLK2 Leonard Foster
PAe001427 Martaantenna_BLK20 Honeybee mzXML_format(78.769 MB)
RAW_format(240.265 MB)

Search_Results(6.888 MB)

ProteinProphet_file(160.677 KB)

README
Martaantenna_BLK20 Leonard Foster
PAe001421 Martaantenna_BLK21 Honeybee mzXML_format(78.198 MB)
RAW_format(231.017 MB)

Search_Results(7.076 MB)

ProteinProphet_file(179.049 KB)

README
Martaantenna_BLK21 Leonard Foster
PAe001444 Martaantenna_BLK22 Honeybee mzXML_format(77.127 MB)
RAW_format(230.262 MB)

Search_Results(6.942 MB)

ProteinProphet_file(168.179 KB)

README
Martaantenna_BLK22 Leonard Foster
PAe001452 Martaantenna_BLK23 Honeybee mzXML_format(80.709 MB)
RAW_format(235.131 MB)

Search_Results(7.274 MB)

ProteinProphet_file(183.235 KB)

README
Martaantenna_BLK23 Leonard Foster
PAe001435 Martaantenna_BLK24 Honeybee mzXML_format(77.268 MB)
RAW_format(227.185 MB)

Search_Results(6.815 MB)

ProteinProphet_file(161.390 KB)

README
Martaantenna_BLK24 Leonard Foster
PAe001429 Martaantenna_BLK25 Honeybee mzXML_format(78.618 MB)
RAW_format(231.138 MB)

Search_Results(6.843 MB)

ProteinProphet_file(149.057 KB)

README
Martaantenna_BLK25 Leonard Foster
PAe001445 Martaantenna_BLK26 Honeybee mzXML_format(79.442 MB)
RAW_format(231.873 MB)

Search_Results(6.995 MB)

ProteinProphet_file(167.430 KB)

README
Martaantenna_BLK26 Leonard Foster
PAe001433 Martaantenna_BLK27 Honeybee mzXML_format(75.454 MB)
RAW_format(212.050 MB)

Search_Results(5.880 MB)

ProteinProphet_file(142.215 KB)

README
Martaantenna_BLK27 Leonard Foster
PAe001446 Martaantenna_BLK28 Honeybee mzXML_format(76.125 MB)
RAW_format(212.961 MB)

Search_Results(6.439 MB)

ProteinProphet_file(143.243 KB)

README
Martaantenna_BLK28 Leonard Foster
PAe001415 Martaantenna_BLK29 Honeybee mzXML_format(77.159 MB)
RAW_format(212.953 MB)

Search_Results(6.821 MB)

ProteinProphet_file(161.126 KB)

README
Martaantenna_BLK29 Leonard Foster
PAe001438 Martaantenna_BLK3 Honeybee mzXML_format(108.310 MB)
RAW_format(374.213 MB)

Search_Results(8.163 MB)

ProteinProphet_file(247.149 KB)

README
Martaantenna_BLK3 Leonard Foster
PAe001419 Martaantenna_BLK30 Honeybee mzXML_format(76.866 MB)
RAW_format(213.704 MB)

Search_Results(6.398 MB)

ProteinProphet_file(134.363 KB)

README
Martaantenna_BLK30 Leonard Foster
PAe001430 Martaantenna_BLK31 Honeybee mzXML_format(76.961 MB)
RAW_format(211.140 MB)

Search_Results(6.798 MB)

ProteinProphet_file(137.648 KB)

README
Martaantenna_BLK31 Leonard Foster
PAe001437 Martaantenna_BLK32 Honeybee mzXML_format(76.961 MB)
RAW_format(209.627 MB)

Search_Results(6.613 MB)

ProteinProphet_file(145.452 KB)

README
Martaantenna_BLK32 Leonard Foster
PAe001416 Martaantenna_BLK33 Honeybee mzXML_format(76.999 MB)
RAW_format(212.357 MB)

Search_Results(6.182 MB)

ProteinProphet_file(156.010 KB)

README
Martaantenna_BLK33 Leonard Foster
PAe001447 Martaantenna_BLK34 Honeybee mzXML_format(78.407 MB)
RAW_format(216.781 MB)

Search_Results(6.271 MB)

ProteinProphet_file(156.607 KB)

README
Martaantenna_BLK34 Leonard Foster
PAe001426 Martaantenna_BLK35 Honeybee mzXML_format(75.589 MB)
RAW_format(208.508 MB)

Search_Results(6.105 MB)

ProteinProphet_file(152.269 KB)

README
Martaantenna_BLK35 Leonard Foster
PAe001418 Martaantenna_BLK36 Honeybee mzXML_format(78.418 MB)
RAW_format(217.380 MB)

Search_Results(6.342 MB)

ProteinProphet_file(154.018 KB)

README
Martaantenna_BLK36 Leonard Foster
PAe001432 Martaantenna_BLK37 Honeybee mzXML_format(78.488 MB)
RAW_format(218.925 MB)

Search_Results(6.304 MB)

ProteinProphet_file(165.456 KB)

README
Martaantenna_BLK37 Leonard Foster
PAe001423 Martaantenna_BLK38 Honeybee mzXML_format(78.715 MB)
RAW_format(217.607 MB)

Search_Results(6.422 MB)

ProteinProphet_file(167.962 KB)

README
Martaantenna_BLK38 Leonard Foster
PAe001441 Martaantenna_BLK4 Honeybee mzXML_format(108.588 MB)
RAW_format(368.566 MB)

Search_Results(7.914 MB)

ProteinProphet_file(211.135 KB)

README
Martaantenna_BLK4 Leonard Foster
PAe001425 Martaantenna_BLK5 Honeybee mzXML_format(106.360 MB)
RAW_format(361.418 MB)

Search_Results(8.123 MB)

ProteinProphet_file(244.258 KB)

README
Martaantenna_BLK5 Leonard Foster
PAe001451 Martaantenna_BLK6 Honeybee mzXML_format(107.911 MB)
RAW_format(368.924 MB)

Search_Results(8.181 MB)

ProteinProphet_file(226.191 KB)

README
Martaantenna_BLK6 Leonard Foster
PAe001420 Martaantenna_BLK7 Honeybee mzXML_format(116.916 MB)
RAW_format(397.964 MB)

Search_Results(8.782 MB)

ProteinProphet_file(270.317 KB)

README
Martaantenna_BLK7 Leonard Foster
PAe001442 Martaantenna_BLK8 Honeybee mzXML_format(112.180 MB)
RAW_format(378.917 MB)

Search_Results(8.627 MB)

ProteinProphet_file(234.871 KB)

README
Martaantenna_BLK8 Leonard Foster
PAe001449 Martaantenna_BLK9 Honeybee mzXML_format(97.653 MB)
RAW_format(343.569 MB)

Search_Results(7.484 MB)

ProteinProphet_file(187.904 KB)

README
Martaantenna_BLK9 Leonard Foster
PAe001330 PAR1657_midguts_BLK1 Honeybee mzXML_format(117.678 MB)
RAW_format(348.417 MB)

Search_Results(5.250 MB)

ProteinProphet_file(193.404 KB)

README
PAR1657_midguts_BLK1 Leonard Foster
PAe001318 PAR1657_midguts_BLK10 Honeybee mzXML_format(110.369 MB)
RAW_format(335.466 MB)

Search_Results(5.066 MB)

ProteinProphet_file(191.482 KB)

README
PAR1657_midguts_BLK10 Leonard Foster
PAe001297 PAR1657_midguts_BLK11 Honeybee mzXML_format(115.046 MB)
RAW_format(349.410 MB)

Search_Results(5.346 MB)

ProteinProphet_file(205.283 KB)

README
PAR1657_midguts_BLK11 Leonard Foster
PAe001332 PAR1657_midguts_BLK12 Honeybee mzXML_format(135.608 MB)
RAW_format(412.436 MB)

Search_Results(6.145 MB)

ProteinProphet_file(210.672 KB)

README
PAR1657_midguts_BLK12 Leonard Foster
PAe001304 PAR1657_midguts_BLK13 Honeybee mzXML_format(106.632 MB)
RAW_format(347.645 MB)

Search_Results(4.333 MB)

ProteinProphet_file(171.553 KB)

README
PAR1657_midguts_BLK13 Leonard Foster
PAe001320 PAR1657_midguts_BLK14 Honeybee mzXML_format(87.861 MB)
RAW_format(275.914 MB)

Search_Results(3.917 MB)

ProteinProphet_file(150.062 KB)

README
PAR1657_midguts_BLK14 Leonard Foster
PAe001323 PAR1657_midguts_BLK15 Honeybee mzXML_format(112.511 MB)
RAW_format(345.684 MB)

Search_Results(4.955 MB)

ProteinProphet_file(176.917 KB)

README
PAR1657_midguts_BLK15 Leonard Foster
PAe001331 PAR1657_midguts_BLK16 Honeybee mzXML_format(110.418 MB)
RAW_format(343.245 MB)

Search_Results(4.943 MB)

ProteinProphet_file(198.709 KB)

README
PAR1657_midguts_BLK16 Leonard Foster
PAe001315 PAR1657_midguts_BLK17 Honeybee mzXML_format(125.049 MB)
RAW_format(347.170 MB)

Search_Results(6.319 MB)

ProteinProphet_file(263.297 KB)

README
PAR1657_midguts_BLK17 Leonard Foster
PAe001309 PAR1657_midguts_BLK18 Honeybee mzXML_format(127.928 MB)
RAW_format(349.508 MB)

Search_Results(6.396 MB)

ProteinProphet_file(250.880 KB)

README
PAR1657_midguts_BLK18 Leonard Foster
PAe001314 PAR1657_midguts_BLK19 Honeybee mzXML_format(125.615 MB)
RAW_format(347.282 MB)

Search_Results(6.282 MB)

ProteinProphet_file(250.153 KB)

README
PAR1657_midguts_BLK19 Leonard Foster
PAe001336 PAR1657_midguts_BLK2 Honeybee mzXML_format(118.407 MB)
RAW_format(348.576 MB)

Search_Results(5.476 MB)

ProteinProphet_file(211.176 KB)

README
PAR1657_midguts_BLK2 Leonard Foster
PAe001311 PAR1657_midguts_BLK20 Honeybee mzXML_format(121.437 MB)
RAW_format(344.423 MB)

Search_Results(5.932 MB)

ProteinProphet_file(202.320 KB)

README
PAR1657_midguts_BLK20 Leonard Foster
PAe001333 PAR1657_midguts_BLK21 Honeybee mzXML_format(122.286 MB)
RAW_format(343.373 MB)

Search_Results(5.932 MB)

ProteinProphet_file(179.814 KB)

README
PAR1657_midguts_BLK21 Leonard Foster
PAe001316 PAR1657_midguts_BLK22 Honeybee mzXML_format(122.359 MB)
RAW_format(345.129 MB)

Search_Results(6.118 MB)

ProteinProphet_file(221.726 KB)

README
PAR1657_midguts_BLK22 Leonard Foster
PAe001293 PAR1657_midguts_BLK23 Honeybee mzXML_format(122.513 MB)
RAW_format(346.996 MB)

Search_Results(5.986 MB)

ProteinProphet_file(208.551 KB)

README
PAR1657_midguts_BLK23 Leonard Foster
PAe001319 PAR1657_midguts_BLK24 Honeybee mzXML_format(121.338 MB)
RAW_format(341.752 MB)

Search_Results(5.919 MB)

ProteinProphet_file(195.001 KB)

README
PAR1657_midguts_BLK24 Leonard Foster
PAe001295 PAR1657_midguts_BLK25 Honeybee mzXML_format(122.193 MB)
RAW_format(344.593 MB)

Search_Results(5.868 MB)

ProteinProphet_file(170.675 KB)

README
PAR1657_midguts_BLK25 Leonard Foster
PAe001301 PAR1657_midguts_BLK26 Honeybee mzXML_format(118.397 MB)
RAW_format(338.571 MB)

Search_Results(5.818 MB)

ProteinProphet_file(205.518 KB)

README
PAR1657_midguts_BLK26 Leonard Foster
PAe001335 PAR1657_midguts_BLK27 Honeybee mzXML_format(123.397 MB)
RAW_format(347.841 MB)

Search_Results(5.999 MB)

ProteinProphet_file(184.381 KB)

README
PAR1657_midguts_BLK27 Leonard Foster
PAe001305 PAR1657_midguts_BLK28 Honeybee mzXML_format(119.895 MB)
RAW_format(343.780 MB)

Search_Results(5.518 MB)

ProteinProphet_file(126.225 KB)

README
PAR1657_midguts_BLK28 Leonard Foster
PAe001313 PAR1657_midguts_BLK29 Honeybee mzXML_format(116.216 MB)
RAW_format(337.387 MB)

Search_Results(5.784 MB)

ProteinProphet_file(234.302 KB)

README
PAR1657_midguts_BLK29 Leonard Foster
PAe001327 PAR1657_midguts_BLK3 Honeybee mzXML_format(115.504 MB)
RAW_format(345.918 MB)

Search_Results(5.172 MB)

ProteinProphet_file(169.478 KB)

README
PAR1657_midguts_BLK3 Leonard Foster
PAe001312 PAR1657_midguts_BLK30 Honeybee mzXML_format(124.575 MB)
RAW_format(348.324 MB)

Search_Results(6.006 MB)

ProteinProphet_file(177.524 KB)

README
PAR1657_midguts_BLK30 Leonard Foster
PAe001296 PAR1657_midguts_BLK31 Honeybee mzXML_format(121.931 MB)
RAW_format(346.658 MB)

Search_Results(6.127 MB)

ProteinProphet_file(243.525 KB)

README
PAR1657_midguts_BLK31 Leonard Foster
PAe001317 PAR1657_midguts_BLK32 Honeybee mzXML_format(120.593 MB)
RAW_format(345.118 MB)

Search_Results(5.592 MB)

ProteinProphet_file(189.184 KB)

README
PAR1657_midguts_BLK32 Leonard Foster
PAe001308 PAR1657_midguts_BLK33 Honeybee mzXML_format(111.537 MB)
RAW_format(362.780 MB)

Search_Results(4.158 MB)

ProteinProphet_file(133.811 KB)

README
PAR1657_midguts_BLK33 Leonard Foster
PAe001321 PAR1657_midguts_BLK34 Honeybee mzXML_format(107.440 MB)
RAW_format(364.176 MB)

Search_Results(3.784 MB)

ProteinProphet_file(131.264 KB)

README
PAR1657_midguts_BLK34 Leonard Foster
PAe001299 PAR1657_midguts_BLK35 Honeybee mzXML_format(106.808 MB)
RAW_format(356.349 MB)

Search_Results(3.709 MB)

ProteinProphet_file(97.270 KB)

README
PAR1657_midguts_BLK35 Leonard Foster
PAe001294 PAR1657_midguts_BLK36 Honeybee mzXML_format(108.072 MB)
RAW_format(364.378 MB)

Search_Results(3.691 MB)

ProteinProphet_file(117.974 KB)

README
PAR1657_midguts_BLK36 Leonard Foster
PAe001324 PAR1657_midguts_BLK37 Honeybee mzXML_format(112.097 MB)
RAW_format(363.827 MB)

Search_Results(4.129 MB)

ProteinProphet_file(136.548 KB)

README
PAR1657_midguts_BLK37 Leonard Foster
PAe001302 PAR1657_midguts_BLK38 Honeybee mzXML_format(109.913 MB)
RAW_format(362.739 MB)

Search_Results(3.886 MB)

ProteinProphet_file(131.357 KB)

README
PAR1657_midguts_BLK38 Leonard Foster
PAe001325 PAR1657_midguts_BLK39 Honeybee mzXML_format(109.685 MB)
RAW_format(358.965 MB)

Search_Results(3.837 MB)

ProteinProphet_file(117.325 KB)

README
PAR1657_midguts_BLK39 Leonard Foster
PAe001307 PAR1657_midguts_BLK4 Honeybee mzXML_format(116.075 MB)
RAW_format(343.189 MB)

Search_Results(5.315 MB)

ProteinProphet_file(187.388 KB)

README
PAR1657_midguts_BLK4 Leonard Foster
PAe001300 PAR1657_midguts_BLK40 Honeybee mzXML_format(109.546 MB)
RAW_format(369.244 MB)

Search_Results(2.086 MB)

ProteinProphet_file(91.043 KB)

README
PAR1657_midguts_BLK40 Leonard Foster
PAe001334 PAR1657_midguts_BLK41 Honeybee mzXML_format(117.541 MB)
RAW_format(371.635 MB)

Search_Results(5.159 MB)

ProteinProphet_file(171.522 KB)

README
PAR1657_midguts_BLK41 Leonard Foster
PAe001399 WAdultHeadMinusAntenna_PeptideMicrorotofor_B1T1 Honeybee mzXML_format(288.925 MB)
RAW_format(797.438 MB)

Search_Results(10.196 MB)

ProteinProphet_file(370.478 KB)

README
WAdultHeadMinusAntenna_PeptideMicrorotofor_B1T1 Leonard Foster
PAe001406 WAdultHeadMinusAntenna_PeptideMicrorotofor_B1T2 Honeybee mzXML_format(299.637 MB)
RAW_format(806.583 MB)

Search_Results(11.445 MB)

ProteinProphet_file(408.245 KB)

README
WAdultHeadMinusAntenna_PeptideMicrorotofor_B1T2 Leonard Foster
PAe001398 WAdultHeadMinusAntenna_PeptideMicrorotofor_B1T3 Honeybee mzXML_format(282.820 MB)
RAW_format(784.907 MB)

Search_Results(9.888 MB)

ProteinProphet_file(355.146 KB)

README
WAdultHeadMinusAntenna_PeptideMicrorotofor_B1T3 Leonard Foster
PAe001411 WAdultHeadMinusAntenna_PeptideNoFrac_B1T1 Honeybee mzXML_format(324.707 MB)
RAW_format(783.817 MB)

Search_Results(18.709 MB)

ProteinProphet_file(306.122 KB)

README
WAdultHeadMinusAntenna_PeptideNoFrac_B1T1 Leonard Foster
PAe001394 WAdultHeadMinusAntenna_PeptideNoFrac_B1T2 Honeybee mzXML_format(331.981 MB)
RAW_format(779.720 MB)

Search_Results(14.915 MB)

ProteinProphet_file(307.824 KB)

README
WAdultHeadMinusAntenna_PeptideNoFrac_B1T2 Leonard Foster
PAe001404 WAdultHeadMinusAntenna_PeptideNoFrac_B1T3 Honeybee mzXML_format(316.853 MB)
RAW_format(781.895 MB)

Search_Results(14.957 MB)

ProteinProphet_file(332.515 KB)

README
WAdultHeadMinusAntenna_PeptideNoFrac_B1T3 Leonard Foster
PAe001413 WAdultHeadMinusAntenna_PeptideOffgel_B1T1 Honeybee mzXML_format(322.116 MB)
RAW_format(944.589 MB)

Search_Results(10.796 MB)

ProteinProphet_file(500.280 KB)

README
WAdultHeadMinusAntenna_PeptideOffgel_B1T1 Leonard Foster
PAe001402 WAdultHeadMinusAntenna_PeptideOffgel_B1T2 Honeybee mzXML_format(325.410 MB)
RAW_format(939.852 MB)

Search_Results(11.217 MB)

ProteinProphet_file(528.280 KB)

README
WAdultHeadMinusAntenna_PeptideOffgel_B1T2 Leonard Foster
PAe001408 WAdultHeadMinusAntenna_PeptideOffgel_B1T3 Honeybee mzXML_format(304.937 MB)
RAW_format(919.920 MB)

Search_Results(10.114 MB)

ProteinProphet_file(496.194 KB)

README
WAdultHeadMinusAntenna_PeptideOffgel_B1T3 Leonard Foster
PAe001412 WAdultHeadMinusAntenna_PeptideSCX_B1T1 Honeybee mzXML_format(278.691 MB)
RAW_format(772.773 MB)

Search_Results(11.102 MB)

ProteinProphet_file(421.124 KB)

README
WAdultHeadMinusAntenna_PeptideSCX_B1T1 Leonard Foster
PAe001407 WAdultHeadMinusAntenna_PeptideSCX_B1T2 Honeybee mzXML_format(286.236 MB)
RAW_format(774.892 MB)

Search_Results(11.846 MB)

ProteinProphet_file(437.887 KB)

README
WAdultHeadMinusAntenna_PeptideSCX_B1T2 Leonard Foster
PAe001395 WAdultHeadMinusAntenna_PeptideSCX_B1T3 Honeybee mzXML_format(289.143 MB)
RAW_format(779.761 MB)

Search_Results(11.917 MB)

ProteinProphet_file(442.525 KB)

README
WAdultHeadMinusAntenna_PeptideSCX_B1T3 Leonard Foster
PAe001405 WAdultHeadMinusAntenna_ProteinMicrorotofor_B1T1 Honeybee mzXML_format(281.604 MB)
RAW_format(789.391 MB)

Search_Results(10.150 MB)

ProteinProphet_file(423.294 KB)

README
WAdultHeadMinusAntenna_ProteinMicrorotofor_B1T1 Leonard Foster
PAe001400 WAdultHeadMinusAntenna_ProteinMicrorotofor_B1T2 Honeybee mzXML_format(281.712 MB)
RAW_format(796.073 MB)

Search_Results(10.169 MB)

ProteinProphet_file(426.380 KB)

README
WAdultHeadMinusAntenna_ProteinMicrorotofor_B1T2 Leonard Foster
PAe001403 WAdultHeadMinusAntenna_ProteinMicrorotofor_B1T3 Honeybee mzXML_format(277.486 MB)
RAW_format(781.795 MB)

Search_Results(10.266 MB)

ProteinProphet_file(386.725 KB)

README
WAdultHeadMinusAntenna_ProteinMicrorotofor_B1T3 Leonard Foster
PAe001410 WAdultHeadMinusAntenna_ProteinNoFrac_B1T1 Honeybee mzXML_format(315.799 MB)
RAW_format(808.305 MB)

Search_Results(14.266 MB)

ProteinProphet_file(300.289 KB)

README
WAdultHeadMinusAntenna_ProteinNoFrac_B1T1 Leonard Foster
PAe001409 WAdultHeadMinusAntenna_ProteinNoFrac_B1T2 Honeybee mzXML_format(319.378 MB)
RAW_format(815.744 MB)

Search_Results(15.694 MB)

ProteinProphet_file(312.396 KB)

README
WAdultHeadMinusAntenna_ProteinNoFrac_B1T2 Leonard Foster
PAe001392 WAdultHeadMinusAntenna_ProteinNoFrac_B1T3 Honeybee mzXML_format(296.301 MB)
RAW_format(796.918 MB)

Search_Results(12.364 MB)

ProteinProphet_file(289.681 KB)

README
WAdultHeadMinusAntenna_ProteinNoFrac_B1T3 Leonard Foster
PAe001391 WAdultHeadMinusAntenna_ProteinOffgel_B1T1 Honeybee mzXML_format(354.514 MB)
RAW_format(1.022 GB)

Search_Results(12.485 MB)

ProteinProphet_file(531.095 KB)

README
WAdultHeadMinusAntenna_ProteinOffgel_B1T1 Leonard Foster
PAe001414 WAdultHeadMinusAntenna_ProteinOffgel_B1T2 Honeybee mzXML_format(356.493 MB)
RAW_format(1.034 GB)

Search_Results(12.554 MB)

ProteinProphet_file(541.089 KB)

README
WAdultHeadMinusAntenna_ProteinOffgel_B1T2 Leonard Foster
PAe001401 WAdultHeadMinusAntenna_ProteinOffgel_B1T3 Honeybee mzXML_format(348.714 MB)
RAW_format(1.005 GB)

Search_Results(12.345 MB)

ProteinProphet_file(505.573 KB)

README
WAdultHeadMinusAntenna_ProteinOffgel_B1T3 Leonard Foster
PAe001397 WAdultHeadMinusAntenna_ProteinPAGE_B1T1 Honeybee mzXML_format(331.292 MB)
RAW_format(825.768 MB)

Search_Results(14.286 MB)

ProteinProphet_file(792.405 KB)

README
WAdultHeadMinusAntenna_ProteinPAGE_B1T1 Leonard Foster
PAe001393 WAdultHeadMinusAntenna_ProteinPAGE_B1T2 Honeybee mzXML_format(329.743 MB)
RAW_format(830.689 MB)

Search_Results(14.045 MB)

ProteinProphet_file(793.715 KB)

README
WAdultHeadMinusAntenna_ProteinPAGE_B1T2 Leonard Foster
PAe001396 WAdultHeadMinusAntenna_ProteinPAGE_B1T3 Honeybee mzXML_format(320.825 MB)
RAW_format(808.605 MB)

Search_Results(14.164 MB)

ProteinProphet_file(802.333 KB)

README
WAdultHeadMinusAntenna_ProteinPAGE_B1T3 Leonard Foster
PAe001234 WLarvHemo_1v3dB1T1 Honeybee mzXML_format(281.852 MB)
RAW_format(898.267 MB)

Search_Results(15.532 MB)

ProteinProphet_file(541.919 KB)

README
WLarvHemo_1v3dB1T1 Leonard Foster
PAe001269 WLarvHemo_1v3dB1T2 Honeybee mzXML_format(171.982 MB)
RAW_format(589.527 MB)

Search_Results(10.282 MB)

ProteinProphet_file(333.978 KB)

README
WLarvHemo_1v3dB1T2 Leonard Foster
PAe001163 WLarvHemo_1v3dB2T1 Honeybee mzXML_format(190.148 MB)
RAW_format(625.369 MB)

Search_Results(11.134 MB)

ProteinProphet_file(343.746 KB)

README
WLarvHemo_1v3dB2T1 Leonard Foster
PAe001178 WLarvHemo_1v3dB3T1 Honeybee mzXML_format(173.126 MB)
RAW_format(534.111 MB)

Search_Results(10.943 MB)

ProteinProphet_file(459.322 KB)

README
WLarvHemo_1v3dB3T1 Leonard Foster
PAe001256 WLarvHemo_1v3dB3T2 Honeybee mzXML_format(364.577 MB)
RAW_format(1.125 GB)

Search_Results(19.915 MB)

ProteinProphet_file(639.134 KB)

README
WLarvHemo_1v3dB3T2 Leonard Foster
PAe001210 WLarvHemo_1v3dB3T3 Honeybee mzXML_format(322.329 MB)
RAW_format(996.217 MB)

Search_Results(18.562 MB)

ProteinProphet_file(591.994 KB)

README
WLarvHemo_1v3dB3T3 Leonard Foster
PAe001263 WLarvHemo_2v3dB1T1 Honeybee mzXML_format(249.405 MB)
RAW_format(798.961 MB)

Search_Results(15.391 MB)

ProteinProphet_file(551.135 KB)

README
WLarvHemo_2v3dB1T1 Leonard Foster
PAe001197 WLarvHemo_2v3dB2T1 Honeybee mzXML_format(286.713 MB)
RAW_format(1.096 GB)

Search_Results(17.022 MB)

ProteinProphet_file(282.993 KB)

README
WLarvHemo_2v3dB2T1 Leonard Foster
PAe001259 WLarvHemo_2v3dB3T1 Honeybee mzXML_format(320.142 MB)
RAW_format(1.012 GB)

Search_Results(19.188 MB)

ProteinProphet_file(377.217 KB)

README
WLarvHemo_2v3dB3T1 Leonard Foster
PAe001235 WLarvHemo_2v3dB3T2 Honeybee mzXML_format(71.085 MB)
RAW_format(264.827 MB)

Search_Results(3.164 MB)

ProteinProphet_file(93.072 KB)

README
WLarvHemo_2v3dB3T2 Leonard Foster
PAe001153 WLarvHemo_3v4dB1T1 Honeybee mzXML_format(235.371 MB)
RAW_format(773.813 MB)

Search_Results(15.381 MB)

ProteinProphet_file(547.268 KB)

README
WLarvHemo_3v4dB1T1 Leonard Foster
PAe001240 WLarvHemo_3v4dB1T2 Honeybee mzXML_format(317.315 MB)
RAW_format(978.570 MB)

Search_Results(18.023 MB)

ProteinProphet_file(493.562 KB)

README
WLarvHemo_3v4dB1T2 Leonard Foster
PAe001166 WLarvHemo_3v4dB2T1 Honeybee mzXML_format(294.836 MB)
RAW_format(1.128 GB)

Search_Results(16.645 MB)

ProteinProphet_file(263.162 KB)

README
WLarvHemo_3v4dB2T1 Leonard Foster
PAe001172 WLarvHemo_3v4dB3T1 Honeybee mzXML_format(263.268 MB)
RAW_format(815.597 MB)

Search_Results(14.677 MB)

ProteinProphet_file(324.023 KB)

README
WLarvHemo_3v4dB3T1 Leonard Foster
PAe001162 WLarvHemo_3v4dB3T2 Honeybee mzXML_format(125.077 MB)
RAW_format(431.266 MB)

Search_Results(6.394 MB)

ProteinProphet_file(171.695 KB)

README
WLarvHemo_3v4dB3T2 Leonard Foster
PAe001203 WLarvHemo_3v5dB1T1 Honeybee mzXML_format(265.273 MB)
RAW_format(851.000 MB)

Search_Results(15.952 MB)

ProteinProphet_file(561.032 KB)

README
WLarvHemo_3v5dB1T1 Leonard Foster
PAe001152 WLarvHemo_3v5dB1T2 Honeybee mzXML_format(309.692 MB)
RAW_format(960.983 MB)

Search_Results(17.282 MB)

ProteinProphet_file(496.096 KB)

README
WLarvHemo_3v5dB1T2 Leonard Foster
PAe001192 WLarvHemo_3v5dB2T1 Honeybee mzXML_format(340.538 MB)
RAW_format(1.184 GB)

Search_Results(22.498 MB)

ProteinProphet_file(639.124 KB)

README
WLarvHemo_3v5dB2T1 Leonard Foster
PAe001274 WLarvHemo_3v5dB3T1 Honeybee mzXML_format(356.512 MB)
RAW_format(1.150 GB)

Search_Results(21.041 MB)

ProteinProphet_file(342.118 KB)

README
WLarvHemo_3v5dB3T1 Leonard Foster
PAe001189 WLarvHemo_3v5dB3T2 Honeybee mzXML_format(74.365 MB)
RAW_format(256.427 MB)

Search_Results(5.093 MB)

ProteinProphet_file(202.902 KB)

README
WLarvHemo_3v5dB3T2 Leonard Foster
PAe001242 WLarvHemo_SAXfracs_B1T1 Honeybee mzXML_format(214.778 MB)
RAW_format(758.558 MB)

Search_Results(27.299 MB)

ProteinProphet_file(347.825 KB)

README
WLarvHemo_SAXfracs_B1T1 Leonard Foster
PAe001155 WLarvHemo_SAXfracs_B2T1 Honeybee mzXML_format(46.048 MB)
RAW_format(159.892 MB)

Search_Results(5.416 MB)

ProteinProphet_file(122.664 KB)

README
WLarvHemo_SAXfracs_B2T1 Leonard Foster
PAe001177 WLarvHemo_SAXfracs_B2T2 Honeybee mzXML_format(48.845 MB)
RAW_format(168.651 MB)

Search_Results(5.668 MB)

ProteinProphet_file(157.091 KB)

README
WLarvHemo_SAXfracs_B2T2 Leonard Foster
PAe001264 WLarvHemo_SAXfracs_B2T3 Honeybee mzXML_format(53.536 MB)
RAW_format(183.228 MB)

Search_Results(5.878 MB)

ProteinProphet_file(162.701 KB)

README
WLarvHemo_SAXfracs_B2T3 Leonard Foster
PAe001209 WLarvHemo_SAXfracs_B2T4 Honeybee mzXML_format(48.635 MB)
RAW_format(165.578 MB)

Search_Results(5.805 MB)

ProteinProphet_file(197.857 KB)

README
WLarvHemo_SAXfracs_B2T4 Leonard Foster
PAe001145 WLarvHemo_SAXfracs_B3T1 Honeybee mzXML_format(322.300 MB)
RAW_format(1.118 GB)

Search_Results(35.124 MB)

ProteinProphet_file(444.966 KB)

README
WLarvHemo_SAXfracs_B3T1 Leonard Foster
PAe001238 WLarvHemo_SAXfracs_B4T1 Honeybee mzXML_format(574.697 MB)
RAW_format(1.933 GB)

Search_Results(81.848 MB)

ProteinProphet_file(533.689 KB)

README
WLarvHemo_SAXfracs_B4T1 Leonard Foster
PAe001181 WLarvHemo_SAXfracs_B5T1 Honeybee mzXML_format(219.852 MB)
RAW_format(738.844 MB)

Search_Results(23.981 MB)

ProteinProphet_file(270.815 KB)

README
WLarvHemo_SAXfracs_B5T1 Leonard Foster
PAe001250 WLarvHemo_SAXfracs_B5T2 Honeybee mzXML_format(193.655 MB)
RAW_format(634.286 MB)

Search_Results(23.038 MB)

ProteinProphet_file(282.353 KB)

README
WLarvHemo_SAXfracs_B5T2 Leonard Foster
PAe001228 WLarvTiss_1v3dB1T1 Honeybee mzXML_format(417.318 MB)
RAW_format(1.803 GB)

Search_Results(11.950 MB)

ProteinProphet_file(527.630 KB)

README
WLarvTiss_1v3dB1T1 Leonard Foster
PAe001255 WLarvTiss_1v3dB2T1 Honeybee mzXML_format(421.336 MB)
RAW_format(1.370 GB)

Search_Results(21.778 MB)

ProteinProphet_file(555.414 KB)

README
WLarvTiss_1v3dB2T1 Leonard Foster
PAe001179 WLarvTiss_1v3dB3T1 Honeybee mzXML_format(336.913 MB)
RAW_format(1.113 GB)

Search_Results(18.958 MB)

ProteinProphet_file(603.572 KB)

README
WLarvTiss_1v3dB3T1 Leonard Foster
PAe001158 WLarvTiss_2v3dB1T1 Honeybee mzXML_format(423.558 MB)
RAW_format(1.808 GB)

Search_Results(11.440 MB)

ProteinProphet_file(488.938 KB)

README
WLarvTiss_2v3dB1T1 Leonard Foster
PAe001151 WLarvTiss_2v3dB2T1 Honeybee mzXML_format(398.950 MB)
RAW_format(1.335 GB)

Search_Results(22.315 MB)

ProteinProphet_file(539.988 KB)

README
WLarvTiss_2v3dB2T1 Leonard Foster
PAe001202 WLarvTiss_2v3dB3T1 Honeybee mzXML_format(324.918 MB)
RAW_format(1.077 GB)

Search_Results(19.518 MB)

ProteinProphet_file(526.567 KB)

README
WLarvTiss_2v3dB3T1 Leonard Foster
PAe001275 WLarvTiss_3v4dB1T1 Honeybee mzXML_format(433.051 MB)
RAW_format(1.858 GB)

Search_Results(12.391 MB)

ProteinProphet_file(483.635 KB)

README
WLarvTiss_3v4dB1T1 Leonard Foster
PAe001196 WLarvTiss_3v4dB2T1 Honeybee mzXML_format(403.333 MB)
RAW_format(1.355 GB)

Search_Results(21.342 MB)

ProteinProphet_file(492.072 KB)

README
WLarvTiss_3v4dB2T1 Leonard Foster
PAe001211 WLarvTiss_3v4dB3T1 Honeybee mzXML_format(366.698 MB)
RAW_format(1.136 GB)

Search_Results(18.979 MB)

ProteinProphet_file(574.812 KB)

README
WLarvTiss_3v4dB3T1 Leonard Foster
PAe001169 WLarvTiss_3v5dB1T1 Honeybee mzXML_format(421.866 MB)
RAW_format(1.815 GB)

Search_Results(11.958 MB)

ProteinProphet_file(505.793 KB)

README
WLarvTiss_3v5dB1T1 Leonard Foster
PAe001168 WLarvTiss_3v5dB2T1 Honeybee mzXML_format(326.931 MB)
RAW_format(1.121 GB)

Search_Results(18.515 MB)

ProteinProphet_file(496.588 KB)

README
WLarvTiss_3v5dB2T1 Leonard Foster
PAe001270 WLarvTiss_3v5dB3T1 Honeybee mzXML_format(407.281 MB)
RAW_format(1.168 GB)

Search_Results(19.533 MB)

ProteinProphet_file(500.564 KB)

README
WLarvTiss_3v5dB3T1 Leonard Foster
PAe000053 cation_ex_lcq Human mzXML_format(1.203 GB)
Search_Results(305.218 MB)

ProteinProphet_file(587.871 KB)

README
Human blood Hui Zhang
PAe001285 Normal_LCQ_Cys_May04 Human mzXML_format(200.375 MB)
Search_Results(65.709 MB)

ProteinProphet_file(189.253 KB)

README
One normal patient. MARS-6 depletion, carboxy amido methylation of Cys, oxidation of Met. Cys-containing peptides only. Unpublished data. Instrument is LCQ but particular model is unsure. Richard Smith
PAe001279 Normal_LCQ_Glyco_Jun04 Human mzXML_format(187.161 MB)
Search_Results(71.106 MB)

ProteinProphet_file(152.257 KB)

README
One healthy subject. MARS-6 depletion, carboxy amido methylation of Cys, oxidation of Met. Glycopeptides only. Richard Smith Liu et al. (2005)
PAe001284 Normal_LCQ_NoCys_May04 Human mzXML_format(246.127 MB)
Search_Results(83.867 MB)

ProteinProphet_file(654.129 KB)

README
One normal patient. MARS-6 depletion, oxidation of Met. Cys-containing peptides EXCLUDED. Unpublished data. Instrument is LCQ but specific model is unsure. Richard Smith
PAe001283 Normal_LCQ_NoCys_Oct04 Human mzXML_format(224.787 MB)
Search_Results(81.865 MB)

ProteinProphet_file(751.078 KB)

README
One normal patient. MARS-6 depletion, oxidation of Met. Cys-containing peptides EXCLUDED. Unpublished data. Instrument is LCQ but specific model is unsure. Richard Smith
PAe001289 Normal_LTQ_Cys_Dec04 Human mzXML_format(1.829 GB)
Search_Results(370.611 MB)

ProteinProphet_file(1.269 MB)

README
One normal patient. MARS-6 depletion, carboxy amido methylation of Cys, oxidation of Met. Cys-containing peptides only. Unpublished data. Richard Smith
PAe001282 Normal_LTQ_Glyco_Nov04 Human mzXML_format(1.392 GB)
Search_Results(601.357 MB)

ProteinProphet_file(499.038 KB)

README
One healthy subject. MARS-6 depletion, carboxy amido methylation of Cys, oxidation of Met. Glycopeptides only. Instrument: LCQ (unsure of particular model) Richard Smith Liu et al. (2005)
PAe001291 PPP-2 Human mzXML_format(556)
Search_Results(294.006 MB)

ProteinProphet_file(334.539 KB)

README
Human plasma data submitted to ProteomExchange as part of the Plasma Proteome Project phase II. Parag Mallick
PAe000282 serum_FFE_2006_LTQ Human mzXML_format(3.467 GB)
RAW_format(3.216 GB)

Search_Results(756.492 MB)

ProteinProphet_file(788.500 KB)

README
Serum free-flow (FFE) on LTQ Johan Malmstrom
PAe000280 serum_FFE_2006_LTQ-FT Human mzXML_format(118.650 MB)
Search_Results(16.752 MB)

ProteinProphet_file(86.641 KB)

README
Serum free-flow (FFE) on LTQ-FT Johan Malmstrom
PAe000279 serum_OGE_2006_LTQ Human mzXML_format(1.950 GB)
RAW_format(1.794 GB)

Search_Results(232.863 MB)

ProteinProphet_file(788.483 KB)

README
Serum off-gel electrophoresis (OGE) on LTQ Johan Malmstrom
PAe000281 serum_OGE_2006_LTQ-FT Human mzXML_format(826.819 MB)
RAW_format(12.922 GB)

Search_Results(126.314 MB)

ProteinProphet_file(1.535 MB)

README
Serum off-gel electrophoresis (OGE) on LTQ-FT Johan Malmstrom
PAe001286 Trauma_LTQ_Cys_Apr05 Human mzXML_format(2.379 GB)
Search_Results(249.537 MB)

ProteinProphet_file(1.352 MB)

README
Pool of 6 severe trauma patients. IgY-12 depletion, carboxy amido methylation of Cys, oxidation of Met. Cys-containing peptides only. Richard Smith Liu et al. (2006)
PAe001288 Trauma_LTQ_Cys_Mar05 Human mzXML_format(2.499 GB)
Search_Results(283.241 MB)

ProteinProphet_file(1.525 MB)

README
Pool of 6 severe trauma patients. IgY-12 depletion, carboxy amido methylation of Cys, oxidation of Met. Cys-containing peptides only. Richard Smith Liu et al. (2006)
PAe001280 Trauma_LTQ_Glyco_Apr05 Human mzXML_format(2.180 GB)
Search_Results(442.018 MB)

ProteinProphet_file(1.166 MB)

README
Pool of 6 severe trauma patients. IgY-12 depletion, carboxy amido methylation of Cys, oxidation of Met. Glycopeptides only. Richard Smith Liu et al. (2006)
PAe001281 Trauma_LTQ_Glyco_Mar05 Human mzXML_format(2.285 GB)
Search_Results(564.735 MB)

ProteinProphet_file(1.310 MB)

README
Pool of 6 severe trauma patients. IgY-12 depletion, carboxy amido methylation of Cys, oxidation of Met. Glycopeptides only. Richard Smith Liu et al. (2006)
PAe001290 Trauma_LTQ_NoCys_Mar05 Human mzXML_format(2.212 GB)
Search_Results(366.196 MB)

ProteinProphet_file(2.196 MB)

README
Pool of 6 severe trauma patients. IgY-12 depletion, oxidation of Met. Cys-containing peptides EXCLUDED. Richard Smith Liu et al. (2006)
PAe001287 Trauma_LTQ_NonGlyco_Apr05 Human mzXML_format(2.317 GB)
Search_Results(312.185 MB)

ProteinProphet_file(2.010 MB)

README
Poo of 6 severe trauma patience. IgY-12 depletion, no Cys reducton, oxidation of Met. Glycopeptides EXCLUDED. Richard Smith Liu et al. (2006)
PAe001352 Dm_Adult_Heads_Cytoplasm_exp_016 Drosophila mzXML_format(6.521 GB)
Search_Results(637.456 MB)

sequest_params0
ProteinProphet_file(738.070 KB)

README
Dm_Adult_Heads_Cytoplasm_exp_016 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001354 Dm_Adult_Heads_Cytoplasm_exp_033 Drosophila mzXML_format(19.303 GB)
Search_Results(923.021 MB)

sequest_params0
ProteinProphet_file(2.134 MB)

README
Dm_Adult_Heads_Cytoplasm_exp_033 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001379 Dm_Adult_Heads_Cytoplasm_exp_044 Drosophila mzXML_format(760.685 MB)
Search_Results(353.939 MB)

sequest_params0
ProteinProphet_file(722.068 KB)

README
Dm_Adult_Heads_Cytoplasm_exp_044 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001382 Dm_Adult_Heads_Membrane_exp_025 Drosophila mzXML_format(7.554 GB)
Search_Results(869.331 MB)

sequest_params0
ProteinProphet_file(1.864 MB)

README
Dm_Adult_Heads_Membrane_exp_025 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001390 Dm_Adult_Heads_Nuclear_exp_031 Drosophila mzXML_format(11.505 GB)
Search_Results(228.557 MB)

sequest_params0
ProteinProphet_file(2.095 MB)

README
Dm_Adult_Heads_Nuclear_exp_031 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001341 Dm_Adult_HL_exp_029 Drosophila mzXML_format(21.954 GB)
Search_Results(1.804 GB)

sequest_params0
ProteinProphet_file(835.266 KB)

README
Dm_Adult_HL_exp_029 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001368 Dm_Adult_membranes_exp_054 Drosophila mzXML_format(8.412 GB)
Search_Results(2.319 GB)

sequest_params0
ProteinProphet_file(1.980 MB)

README
Dm_Adult_membranes_exp_054 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001348 Dm_Adult_Total_CHCl3_exp_042 Drosophila mzXML_format(471.960 MB)
Search_Results(263.017 MB)

sequest_params0
ProteinProphet_file(629.270 KB)

README
Dm_Adult_Total_CHCl3_exp_042 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001388 Dm_Emb_0-24hAEL_exp_055 Drosophila mzXML_format(3.402 GB)
Search_Results(652.854 MB)

sequest_params0
ProteinProphet_file(2.601 MB)

README
Dm_Emb_0-24hAEL_exp_055 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001369 Dm_Emb_0-24hAEL_exp_058 Drosophila mzXML_format(7.518 GB)
Search_Results(324.142 MB)

sequest_params0
ProteinProphet_file(2.072 MB)

README
Dm_Emb_0-24hAEL_exp_058 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001384 Dm_Emb_2hAEL_exp_030 Drosophila mzXML_format(20.844 GB)
Search_Results(657.150 MB)

sequest_params0
ProteinProphet_file(1.891 MB)

README
Dm_Emb_2hAEL_exp_030 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001364 Dm_Kc_CDK4-1_exp_67 Drosophila mzXML_format(194.499 MB)
Search_Results(37.043 MB)

sequest_params0
ProteinProphet_file(100.395 KB)

README
Dm_Kc_CDK4-1_exp_67 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001342 Dm_Kc_exp_068 Drosophila mzXML_format(855.403 MB)
Search_Results(337.837 MB)

sequest_params0
ProteinProphet_file(1.039 MB)

README
Dm_Kc_exp_068 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001376 Dm_Kc_Gel_exp_066 Drosophila mzXML_format(1.222 GB)
Search_Results(347.337 MB)

sequest_params0
ProteinProphet_file(995.591 KB)

README
Dm_Kc_Gel_exp_066 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001349 Dm_Kc_Golgi_exp_045 Drosophila mzXML_format(493.727 MB)
Search_Results(141.028 MB)

sequest_params0
ProteinProphet_file(530.086 KB)

README
Dm_Kc_Golgi_exp_045 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001351 Dm_Kc_lysate_exp_078 Drosophila mzXML_format(361.895 MB)
Search_Results(87.382 MB)

sequest_params0
ProteinProphet_file(372.797 KB)

README
Dm_Kc_lysate_exp_078 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001356 Dm_Kc_lysate_exp_081 Drosophila mzXML_format(325.949 MB)
Search_Results(53.741 MB)

sequest_params0
ProteinProphet_file(335.285 KB)

README
Dm_Kc_lysate_exp_081 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001367 Dm_Kc_lysate_exp_083 Drosophila mzXML_format(333.832 MB)
Search_Results(120.180 MB)

sequest_params0
ProteinProphet_file(448.084 KB)

README
Dm_Kc_lysate_exp_083 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001360 Dm_Kc_membrane_Autophagosomes_exp_026 Drosophila mzXML_format(611.876 MB)
Search_Results(137.465 MB)

sequest_params0
ProteinProphet_file(325.179 KB)

README
Dm_Kc_membrane_Autophagosomes_exp_026 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001365 Dm_Kc_membrane_exp_023 Drosophila mzXML_format(6.601 GB)
Search_Results(2.346 GB)

sequest_params0
ProteinProphet_file(3.591 MB)

README
Dm_Kc_membrane_exp_023 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001385 Dm_Kc_N-Glyc_exp_041 Drosophila mzXML_format(467.722 MB)
Search_Results(73.559 MB)

sequest_params0
ProteinProphet_file(357.769 KB)

README
Dm_Kc_N-Glyc_exp_041 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001359 Dm_Kc_nuclear_Chromatin_exp_037 Drosophila mzXML_format(13.812 GB)
Search_Results(1.693 GB)

sequest_params0
ProteinProphet_file(3.258 MB)

README
Dm_Kc_nuclear_Chromatin_exp_037 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001355 Dm_Kc_nuclear_Chromatin_exp_071 Drosophila mzXML_format(221.239 MB)
Search_Results(47.359 MB)

sequest_params0
ProteinProphet_file(63.762 KB)

README
Dm_Kc_nuclear_Chromatin_exp_071 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001353 Dm_Kc_nuclear_Chromatin_exp_072 Drosophila mzXML_format(1.737 GB)
Search_Results(265.432 MB)

sequest_params0
ProteinProphet_file(233.972 KB)

README
Dm_Kc_nuclear_Chromatin_exp_072 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001372 Dm_Lar_Brain_SalivaryGlands_exp_065 Drosophila mzXML_format(525.336 MB)
Search_Results(284.132 MB)

sequest_params0
ProteinProphet_file(709.087 KB)

README
Dm_Lar_Brain_SalivaryGlands_exp_065 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001386 Dm_Lar_FB_rap_exp_028 Drosophila mzXML_format(17.752 GB)
Search_Results(1.880 GB)

sequest_params0
ProteinProphet_file(1.984 MB)

README
Dm_Lar_FB_rap_exp_028 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001383 Dm_Lar_FB_suc_exp_027 Drosophila mzXML_format(14.588 GB)
Search_Results(1.620 GB)

sequest_params0
ProteinProphet_file(2.183 MB)

README
Dm_Lar_FB_suc_exp_027 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001347 Dm_Lar_FFE_Protein_exp_061 Drosophila mzXML_format(6.460 GB)
Search_Results(135.188 MB)

sequest_params0
ProteinProphet_file(1.375 MB)

README
Dm_Lar_FFE_Protein_exp_061 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001350 Dm_Lar_FFE_Protein_exp_062 Drosophila mzXML_format(5.679 GB)
Search_Results(2.138 GB)

sequest_params0
ProteinProphet_file(1.973 MB)

README
Dm_Lar_FFE_Protein_exp_062 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001374 Dm_Lar_HL_exp_043 Drosophila mzXML_format(1.051 GB)
Search_Results(295.468 MB)

sequest_params0
ProteinProphet_file(484.132 KB)

README
Dm_Lar_HL_exp_043 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001380 Dm_Lar_IPG_exp_057 Drosophila mzXML_format(7.795 GB)
Search_Results(1.057 GB)

sequest_params0
ProteinProphet_file(198.155 KB)

README
Dm_Lar_IPG_exp_057 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001378 Dm_Lar_membrane_exp_038 Drosophila mzXML_format(13.383 GB)
Search_Results(2.517 GB)

sequest_params0
ProteinProphet_file(1.821 MB)

README
Dm_Lar_membrane_exp_038 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001373 Dm_Lar_peptides_FFE_exp_039 Drosophila mzXML_format(830.559 MB)
Search_Results(250.168 MB)

sequest_params0
ProteinProphet_file(152.231 KB)

README
Dm_Lar_peptides_FFE_exp_039 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001370 Dm_Lar_peptides_FFE_exp_063 Drosophila mzXML_format(4.818 GB)
Search_Results(2.147 GB)

sequest_params0
ProteinProphet_file(1.235 MB)

README
Dm_Lar_peptides_FFE_exp_063 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001377 Dm_Lar_peptides_FFE_exp_064 Drosophila mzXML_format(3.837 GB)
Search_Results(1.788 GB)

sequest_params0
ProteinProphet_file(994.709 KB)

README
Dm_Lar_peptides_FFE_exp_064 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001366 Dm_S2_Cytoplasm_FFE_exp_040 Drosophila mzXML_format(7.645 GB)
Search_Results(1.422 GB)

sequest_params0
ProteinProphet_file(1.898 MB)

README
Dm_S2_Cytoplasm_FFE_exp_040 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001381 Dm_S2_cytoplasmic_C5_exp_046 Drosophila mzXML_format(345.410 MB)
Search_Results(158.419 MB)

sequest_params0
ProteinProphet_file(467.839 KB)

README
Dm_S2_cytoplasmic_C5_exp_046 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001389 Dm_S2_cytoplasmic_exp_013 Drosophila mzXML_format(2.175 GB)
Search_Results(548.458 MB)

sequest_params0
ProteinProphet_file(1.062 MB)

README
Dm_S2_cytoplasmic_exp_013 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001387 Dm_S2_cytoplasmic_exp_018 Drosophila mzXML_format(242.630 MB)
Search_Results(149.309 MB)

sequest_params0
ProteinProphet_file(312.755 KB)

README
Dm_S2_cytoplasmic_exp_018 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001363 Dm_S2_cytoplasmic_exp_020 Drosophila mzXML_format(8.282 GB)
Search_Results(1.650 GB)

sequest_params0
ProteinProphet_file(3.939 MB)

README
Dm_S2_cytoplasmic_exp_020 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001340 Dm_S2_cytoplasmic_exp_032 Drosophila mzXML_format(19.864 GB)
Search_Results(225.990 MB)

sequest_params0
ProteinProphet_file(2.687 MB)

README
Dm_S2_cytoplasmic_exp_032 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001371 Dm_S2_cytoplasmic_Insulin_exp_049 Drosophila mzXML_format(478.636 MB)
Search_Results(95.425 MB)

sequest_params0
ProteinProphet_file(65.266 KB)

README
Dm_S2_cytoplasmic_Insulin_exp_049 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001362 Dm_S2_cytoplasmic_IPG_exp_048 Drosophila mzXML_format(136.794 MB)
Search_Results(32.775 MB)

sequest_params0
ProteinProphet_file(107.073 KB)

README
Dm_S2_cytoplasmic_IPG_exp_048 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001357 Dm_S2_membrane_exp_024 Drosophila mzXML_format(10.256 GB)
Search_Results(2.082 GB)

sequest_params0
ProteinProphet_file(3.969 MB)

README
Dm_S2_membrane_exp_024 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001346 Dm_S2_membrane_M3_exp_050 Drosophila mzXML_format(284.850 MB)
Search_Results(121.376 MB)

sequest_params0
ProteinProphet_file(656.374 KB)

README
Dm_S2_membrane_M3_exp_050 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001375 Dm_S2_Nuclear_FFE_exp_053 Drosophila mzXML_format(2.761 GB)
Search_Results(879.480 MB)

sequest_params0
ProteinProphet_file(1.906 MB)

README
Dm_S2_Nuclear_FFE_exp_053 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001345 Dm_S2_nuclear_N45_exp_047 Drosophila mzXML_format(609.244 MB)
Search_Results(235.251 MB)

sequest_params0
ProteinProphet_file(773.643 KB)

README
Dm_S2_nuclear_N45_exp_047 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001361 Kc-Wnt-a-dsh836_exp_082 Drosophila mzXML_format(374.570 MB)
Search_Results(79.699 MB)

sequest_params0
ProteinProphet_file(272.135 KB)

README
Kc-Wnt-a-dsh836_exp_082 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe001343 Kc-Wnt-a-wg2026_exp_079 Drosophila mzXML_format(360.806 MB)
Search_Results(106.818 MB)

sequest_params0
ProteinProphet_file(521.274 KB)

README
Kc-Wnt-a-wg2026_exp_079 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R Brunner et al. (2007)
PAe000245 Halo_itraq11 Halobacterium mzXML_format(2.511 GB)
Search_Results(248.586 MB)

sequest_params0
ProteinProphet_file(157.172 KB)

README
Proteins harvested from cultures recovering from gamma irradiation stress and labeled with iTRAQ, multiplex sample #11 with three time points 30, 40, and 60 min during recovery compared against common reference; Whitehead et al., 2006 Mol Syst Biol. 2(47). Kenia Whitehead and Nitin S Baliga Whitehead et al. (2006)
PAe000347 2007-08-08_SEC_IEF_LTQFT Human mzXML_format(2.086 GB)
RAW_format(27.224 GB)

Search_Results(783.205 MB)

sequest_params0
ProteinProphet_file(741.084 KB)

README
2007-08-08_SEC_IEF_LTQFT Johan Malmstroem
PAe000345 2007-08-24_IEF_GeH_LTQ Human mzXML_format(6.089 GB)
RAW_format(5.593 GB)

Search_Results(718.556 MB)

sequest_params0
ProteinProphet_file(267.473 KB)

README
2007-08-24_IEF_GeH_LTQ Johan Malmstroem
PAe000344 2007-08-24_SEC_OGE_2-Agilent Human mzXML_format(4.796 GB)
RAW_format(9.527 GB)

Search_Results(257.964 MB)

sequest_params0
ProteinProphet_file(107.235 KB)

README
2007-08-24_SEC_OGE_2-Agilent Johan Malmstroem
PAe000348 2007-08-24_SEC_OGE_2-LTQ Human mzXML_format(4.796 GB)
RAW_format(9.527 GB)

Search_Results(498.327 MB)

sequest_params0
ProteinProphet_file(233.164 KB)

README
2007-08-24_SEC_OGE_2-LTQ Johan Malmstroem
PAe000341 2007-08-24_SEC_OGE_2-LTQFT Human mzXML_format(4.796 GB)
RAW_format(9.527 GB)

Search_Results(98.096 MB)

sequest_params0
ProteinProphet_file(139.915 KB)

README
2007-08-24_SEC_OGE_2-LTQFT Johan Malmstroem
PAe000264 BOB_Sensitivity Human mzXML_format(16.947 GB)
Search_Results(482.777 MB)

ProteinProphet_file(617.525 KB)

README
PMallick Plasma sample with spiked in proteins on LTQ FT Parag Mallick
PAe000263 BOB2H_ISB Human mzXML_format(5.753 GB)
Search_Results(146.132 MB)

ProteinProphet_file(219.024 KB)

README
PMallick Plasma sample BOB2H_ISB on LTQ FT Parag Mallick
PAe000266 BOB2L Human mzXML_format(8.759 GB)
Search_Results(286.994 MB)

ProteinProphet_file(428.363 KB)

README
PMallick Plasma sample BOB2L on LTQ FT Parag Mallick
PAe000261 BOB2L_ISB Human mzXML_format(4.369 GB)
Search_Results(113.310 MB)

ProteinProphet_file(239.244 KB)

README
PMallick Plasma sample BOB2L_ISB on LTQ FT Parag Mallick
PAe000267 BOBFreezeThaw Human mzXML_format(4.947 GB)
Search_Results(155.639 MB)

ProteinProphet_file(258.598 KB)

README
Plasma after multiple freeze/thaw cycles Parag Mallick
PAe000029 breakfast_qtof08 Human mzXML_format(4.942 MB)
Search_Results(7.841 MB)

ProteinProphet_file(80.561 KB)

README
Human blood Hui Zhang
PAe000030 caex_qtof08 Human mzXML_format(33.246 MB)
Search_Results(40.549 MB)

ProteinProphet_file(236.996 KB)

README
Human blood Hui Zhang
PAe000031 cat_ex_qtof Human mzXML_format(59.909 MB)
Search_Results(36.419 MB)

ProteinProphet_file(671.347 KB)

README
Human blood Hui Zhang
PAe000950 HsGlycoPlasma35indiv Human mzXML_format(8.486 GB)
RAW_format(5.524 GB)

Search_Results(827.637 MB)

ProteinProphet_file(203.651 KB)

README
HsGlycoPlasma35indiv Julian Watts
PAe000761 HsNormFemUrine_1 Human mzXML_format(403.659 MB)
RAW_format(542.054 MB)

Search_Results(42.927 MB)

sequest_params0
ProteinProphet_file(908.673 KB)

README
Urine from normal female (1) Young Ah Goo
PAe000763 HsNormFemUrine_2 Human mzXML_format(434.580 MB)
RAW_format(583.074 MB)

Search_Results(43.660 MB)

sequest_params0
ProteinProphet_file(2.670 MB)

README
Urine from normal female (2) Young Ah Goo
PAe000764 HsNormMaleUrine_2 Human mzXML_format(434.580 MB)
RAW_format(583.074 MB)

Search_Results(48.537 MB)

sequest_params0
ProteinProphet_file(389.725 KB)

README
Urine from normal male (1) Young Ah Goo
PAe000766 HsNormMaleUrine_2 Human mzXML_format(256.722 MB)
RAW_format(358.398 MB)

Search_Results(47.735 MB)

sequest_params0
ProteinProphet_file(440.679 KB)

README
Urine from normal male (2) Young Ah Goo
PAe000859 hupo1_b1-cit_cam Human mzXML_format(196.348 MB)
RAW_format(78.935 MB)

Search_Results(39.351 MB)

ProteinProphet_file(285.242 KB)

README
hupo1_b1-cit_cam HUPO Lab 1
PAe000817 hupo1_b1-edta_cam Human mzXML_format(201.461 MB)
RAW_format(76.427 MB)

Search_Results(40.587 MB)

ProteinProphet_file(254.783 KB)

README
hupo1_b1-edta_cam HUPO Lab 1
PAe000862 hupo1_b1-hep_cam Human mzXML_format(173.012 MB)
RAW_format(61.751 MB)

Search_Results(36.029 MB)

ProteinProphet_file(260.877 KB)

README
hupo1_b1-hep_cam HUPO Lab 1
PAe000810 hupo1_b1-serum_cam Human mzXML_format(154.475 MB)
RAW_format(43.090 MB)

Search_Results(29.500 MB)

ProteinProphet_file(134.566 KB)

README
hupo1_b1-serum_cam HUPO Lab 1
PAe000825 hupo1_b2-cit_cam Human mzXML_format(191.076 MB)
RAW_format(89.540 MB)

Search_Results(44.704 MB)

ProteinProphet_file(362.402 KB)

README
hupo1_b2-cit_cam HUPO Lab 1
PAe000806 hupo1_b2-edta_cam Human mzXML_format(194.296 MB)
RAW_format(62.268 MB)

Search_Results(37.501 MB)

ProteinProphet_file(263.190 KB)

README
hupo1_b2-edta_cam HUPO Lab 1
PAe000815 hupo1_b2-hep_cam Human mzXML_format(240.062 MB)
RAW_format(106.518 MB)

Search_Results(45.361 MB)

ProteinProphet_file(314.429 KB)

README
hupo1_b2-hep_cam HUPO Lab 1
PAe000857 hupo1_b2-serum_cam Human mzXML_format(183.495 MB)
RAW_format(75.304 MB)

Search_Results(37.769 MB)

ProteinProphet_file(282.945 KB)

README
hupo1_b2-serum_cam HUPO Lab 1
PAe000797 hupo1_b3-serum_cam Human mzXML_format(155.048 MB)
RAW_format(51.681 MB)

Search_Results(29.458 MB)

ProteinProphet_file(142.322 KB)

README
hupo1_b3-serum_cam HUPO Lab 1
PAe000854 hupo17_b1-serum_cam Human mzXML_format(165.141 MB)
RAW_format(147.991 MB)

Search_Results(62.845 MB)

ProteinProphet_file(322.531 KB)

README
hupo17_b1-serum_cam HUPO Lab 17
PAe000064 HUPO28_Ref-CIT Human mzXML_format(8.023 MB)
RAW_format(7.206 MB)

Search_Results(4.100 MB)

ProteinProphet_file(100.139 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000845 hupo46_c1-serum_cam Human mzXML_format(169.545 MB)
RAW_format(150.295 MB)

Search_Results(35.967 MB)

ProteinProphet_file(101.093 KB)

README
hupo46_c1-serum_cam HUPO Lab 46
PAe000876 hupo46_reference_cam Human mzXML_format(1.226 GB)
RAW_format(1.137 GB)

Search_Results(238.752 MB)

ProteinProphet_file(804.097 KB)

README
hupo46_reference_cam HUPO Lab 46
PAe000794 hupo53_reference_cam Human mzXML_format(720.070 MB)
RAW_format(643.086 MB)

Search_Results(290.687 MB)

ProteinProphet_file(1.244 MB)

README
hupo53_reference_cam HUPO Lab 53
PAe000846 hupo55_b1-cit_cam Human mzXML_format(1.038 GB)
RAW_format(964.528 MB)

Search_Results(480.228 MB)

ProteinProphet_file(1.214 MB)

README
hupo55_b1-cit_cam HUPO Lab 55
PAe000819 HUPOPPP33_Deca Human mzXML_format(871.758 MB)
RAW_format(1.139 GB)

Search_Results(70.694 MB)

ProteinProphet_file(226.474 KB)

README
HUPOPPP33_Deca HUPO Lab 33
PAe000277 NIBSC_glyco_qstar Human mzXML_format(2.814 MB)
Search_Results(7.367 MB)

ProteinProphet_file(96.705 KB)

README
HUPO sample NIBSC glycopeptide on ABI QStar Reto Ossola
PAe000074 PID_serum Human mzXML_format(476.540 MB)
Search_Results(420.030 MB)

sequest_params0
ProteinProphet_file(467.866 KB)

README
serum sample Biaoyang Lin
PAe000765 20070612_LTQFT Human mzXML_format(538.875 MB)
RAW_format(501.032 MB)

Search_Results(72.452 MB)

sequest_params0
ProteinProphet_file(961.405 KB)

README
human urine on LTQ-FT Priska von Haller
PAe000762 20070531_LTQ Human mzXML_format(538.875 MB)
RAW_format(501.032 MB)

Search_Results(51.523 MB)

sequest_params0
ProteinProphet_file(1.114 MB)

README
human urine on LTQ Priska von Haller
PAe000350 Li_LTQFT Leptospira interrogans mzXML_format(438.846 MB)
Search_Results(104.498 MB)

sequest_params0
ProteinProphet_file(460.415 KB)

README
Li_LTQFT Johan Malmstroem Martin Beck
PAe000401 Li_LTQFT_incl Leptospira interrogans mzXML_format(638.807 MB)
Search_Results(112.372 MB)

sequest_params0
ProteinProphet_file(454.158 KB)

README
Li_LTQFT_incl Johan Malmstroem
PAe000352 Li_OGE1_3-10_LTQ Leptospira interrogans mzXML_format(974.461 MB)
Search_Results(121.873 MB)

sequest_params0
ProteinProphet_file(281.958 KB)

README
Li_OGE1_3-10_LTQ Johan Malmstroem Martin Beck
PAe000351 Li_OGE3-10_LTQ Leptospira interrogans mzXML_format(1.300 GB)
Search_Results(343.185 MB)

sequest_params0
ProteinProphet_file(743.333 KB)

README
Li_OGE3-10_LTQ Johan Malmstroem Martin Beck
PAe000349 Li_OGE3-7_LTQ Leptospira interrogans mzXML_format(1.500 GB)
Search_Results(334.461 MB)

sequest_params0
ProteinProphet_file(600.090 KB)

README
Li_OGE3-7_LTQ Johan Malmstroem Martin Beck
PAe000383 Li_spores_MALDI_iTRAQ Leptospira interrogans mzXML_format(14.075 MB)
Search_Results(13.408 MB)

sequest_params0
ProteinProphet_file(132.856 KB)

README
Li_spores_MALDI_iTRAQ Johan Malmstroem
PAe000432 CMOP_Ce_CytD C Elegans mzXML_format(11.959 GB)
RAW_format(10.966 GB)

Search_Results(2.205 GB)

sequest_params0
ProteinProphet_file(1.933 MB)

README
Cyt D Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000422 CMOP_Ce_CytL1 C Elegans mzXML_format(19.579 GB)
RAW_format(17.871 GB)

Search_Results(2.817 GB)

sequest_params0
ProteinProphet_file(2.014 MB)

README
Cyt L1 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000441 CMOP_Ce_CytProtFFE C Elegans mzXML_format(3.159 GB)
RAW_format(2.907 GB)

Search_Results(1.187 GB)

sequest_params0
ProteinProphet_file(918.765 KB)

README
Cyt_prot_FFE (01.11.05)_MCX (08.11.05) Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000425 CMOP_Ce_DicerGFP C Elegans mzXML_format(3.455 GB)
RAW_format(3.184 GB)

Search_Results(526.942 MB)

sequest_params0
ProteinProphet_file(510.849 KB)

README
Dicer GFP Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000433 CMOP_Ce_EmbryosBleached C Elegans mzXML_format(7.871 GB)
RAW_format(7.236 GB)

Search_Results(1.777 GB)

sequest_params0
ProteinProphet_file(1.799 MB)

README
embryos bleached Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000440 CMOP_Ce_EmbryosEgg C Elegans mzXML_format(5.224 GB)
RAW_format(4.622 GB)

Search_Results(1.150 GB)

sequest_params0
ProteinProphet_file(1.948 MB)

README
embryos Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000430 CMOP_Ce_EmbryosLaid C Elegans mzXML_format(3.739 GB)
RAW_format(3.439 GB)

Search_Results(904.865 MB)

sequest_params0
ProteinProphet_file(1.131 MB)

README
embryos laid Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000438 CMOP_Ce_ICATFFE C Elegans mzXML_format(15.746 GB)
RAW_format(5.039 GB)

Search_Results(1.156 GB)

sequest_params0
ProteinProphet_file(1.279 MB)

README
FFE-ICAT 04./05.10.05 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000424 CMOP_Ce_ICATTest C Elegans mzXML_format(341.303 MB)
RAW_format(311.788 MB)

Search_Results(50.960 MB)

sequest_params0
ProteinProphet_file(131.595 KB)

README
2 test samples MJ Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000426 CMOP_Ce_IPG C Elegans mzXML_format(7.223 GB)
RAW_format(6.648 GB)

Search_Results(1.614 GB)

sequest_params0
ProteinProphet_file(2.697 MB)

README
IPG peptides Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000421 CMOP_Ce_IPG2 C Elegans mzXML_format(13.753 GB)
RAW_format(12.712 GB)

Search_Results(2.535 GB)

sequest_params0
ProteinProphet_file(1.446 MB)

README
IPG 2 digest (peptides) Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000423 CMOP_Ce_MemD C Elegans mzXML_format(15.811 GB)
RAW_format(14.484 GB)

Search_Results(1.732 GB)

sequest_params0
ProteinProphet_file(2.494 MB)

README
Mem D Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000431 CMOP_Ce_MemL1 C Elegans mzXML_format(11.790 GB)
RAW_format(10.785 GB)

Search_Results(2.256 GB)

sequest_params0
ProteinProphet_file(2.689 MB)

README
Mem L1 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000428 CMOP_Ce_MemL1Cys C Elegans mzXML_format(6.808 GB)
RAW_format(6.227 GB)

Search_Results(715.714 MB)

sequest_params0
ProteinProphet_file(823.127 KB)

README
Mem L1 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000434 CMOP_Ce_Mito C Elegans mzXML_format(12.399 GB)
RAW_format(11.718 GB)

Search_Results(3.821 GB)

sequest_params0
ProteinProphet_file(1.425 MB)

README
mitochondria RG/urea Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000419 CMOP_Ce_MitoMem C Elegans mzXML_format(1.683 GB)
RAW_format(1.551 GB)

Search_Results(637.837 MB)

sequest_params0
ProteinProphet_file(1.435 MB)

README
mit_mem Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000435 CMOP_Ce_MixedFFE0111 C Elegans mzXML_format(16.155 GB)
RAW_format(10.312 GB)

Search_Results(5.040 GB)

sequest_params0
ProteinProphet_file(1.293 MB)

README
peptide FFE 01.11.05 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000437 CMOP_Ce_MixedFFE0609MCX C Elegans mzXML_format(1.956 GB)
RAW_format(1.812 GB)

Search_Results(1.170 GB)

sequest_params0
ProteinProphet_file(868.686 KB)

README
FFE 0609 MCX andSep Pak Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000439 CMOP_Ce_MixedFFE0609SCX C Elegans mzXML_format(8.705 GB)
RAW_format(8.032 GB)

Search_Results(4.012 GB)

sequest_params0
ProteinProphet_file(1.925 MB)

README
FFE 0609 SCX Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000436 CMOP_Ce_MixedFFE2010SCX C Elegans mzXML_format(2.957 GB)
RAW_format(2.719 GB)

Search_Results(562.774 MB)

sequest_params0
ProteinProphet_file(449.795 KB)

README
FFE 2010 SCX Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000420 CMOP_Ce_S2 C Elegans mzXML_format(20.178 GB)
RAW_format(18.597 GB)

Search_Results(643.876 MB)

sequest_params0
ProteinProphet_file(799.969 KB)

README
S2 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe000429 CMOP_Ce_VHL1Del C Elegans mzXML_format(13.418 GB)
RAW_format(12.400 GB)

Search_Results(4.328 GB)

sequest_params0
ProteinProphet_file(2.265 MB)

README
young adults (Ati: vhl-1 deletion) Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmströ, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO Schrimpf et al. (2009)
Schrimpf et al. (2009)
PAe001337 spc-course Yeast mzXML_format(533.879 MB)
RAW_format(323.400 MB)

Search_Results(12.481 MB)

ProteinProphet_file(212.289 KB)

README
spc-course Daniel Martin
PAe000259 Halo_itraq12 Halobacterium mzXML_format(3.895 GB)
Search_Results(2.176 GB)

sequest_params0
ProteinProphet_file(181.880 KB)

README
Proteins harvested from cultures recovering from 0Gy (control) or 2500Gy (experimental) of gamma irradiation stress and labeled with iTRAQ, multiplex sample #12 with three time points 30, 40, 60 min during recovery compared against common reference; Whitehead et al., 2006 Mol Syst Biol. 2(47). Replicate of #11. Kenia Whitehead and Nitin Baliga Whitehead et al. (2006)
PAe000244 pum4 Halobacterium mzXML_format(8.179 MB)
Search_Results(2.864 MB)

sequest_params0
ProteinProphet_file(14.104 KB)

README
enrichment for specialized purple membrane proteins; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000219 YAGmem1 Halobacterium mzXML_format(11.214 MB)
Search_Results(2.753 MB)

sequest_params0
ProteinProphet_file(18.643 KB)

README
enrichment for membrane proteins; Goo et al., 2003, Mol Cell Proteomics 2(8):505 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000217 YAGmem1220 Halobacterium mzXML_format(12.840 MB)
Search_Results(4.704 MB)

sequest_params0
ProteinProphet_file(21.660 KB)

README
enrichment for membrane proteins; GPF 1200-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):506 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000248 YAGmem1220_rpt1 Halobacterium mzXML_format(19.580 MB)
Search_Results(2.947 MB)

sequest_params0
ProteinProphet_file(17.012 KB)

README
enrichment for membrane proteins; GPF 1200-2000 m/z; rpt=replicate; Goo et al., 2003, Mol Cell Proteomics 2(8):507 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000251 YAGmem48 Halobacterium mzXML_format(12.541 MB)
Search_Results(7.906 MB)

sequest_params0
ProteinProphet_file(32.666 KB)

README
enrichment for membrane proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):508 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000179 YAGmem812 Halobacterium mzXML_format(12.175 MB)
Search_Results(8.207 MB)

sequest_params0
ProteinProphet_file(34.875 KB)

README
enrichment for membrane proteins; 800-1200 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):509 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000247 yagpm Halobacterium mzXML_format(12.913 MB)
Search_Results(4.124 MB)

sequest_params0
ProteinProphet_file(23.631 KB)

README
enrichment for specialized purple membrane proteins, cell culture #1, Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000256 yagpm2_1 Halobacterium mzXML_format(8.079 MB)
Search_Results(4.073 MB)

sequest_params0
ProteinProphet_file(26.644 KB)

README
enrichment for specialized purple membrane proteins, cell culture #2 Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000252 yagpm2_2 Halobacterium mzXML_format(8.477 MB)
Search_Results(3.462 MB)

sequest_params0
ProteinProphet_file(25.340 KB)

README
enrichment for specialized purple membrane proteins, cell culture #2 Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000203 yagpm2_3 Halobacterium mzXML_format(11.590 MB)
Search_Results(2.163 MB)

sequest_params0
ProteinProphet_file(17.655 KB)

README
enrichment for specialized purple membrane proteins, cell culture #2 Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000193 yagpm3_1 Halobacterium mzXML_format(7.919 MB)
Search_Results(3.300 MB)

sequest_params0
ProteinProphet_file(22.332 KB)

README
enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000187 yagpm3_2 Halobacterium mzXML_format(8.214 MB)
Search_Results(2.775 MB)

sequest_params0
ProteinProphet_file(21.124 KB)

README
enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000189 yagpm3_3 Halobacterium mzXML_format(11.036 MB)
Search_Results(1.712 MB)

sequest_params0
ProteinProphet_file(16.473 KB)

README
enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000240 yagpt Halobacterium mzXML_format(12.839 MB)
Search_Results(4.587 MB)

sequest_params0
ProteinProphet_file(18.587 KB)

README
enrichment for proteins in precipitant following ultracentrifugation; Goo et al., 2003, Mol Cell Proteomics 2(8):505 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000224 YAGsn1 Halobacterium mzXML_format(11.088 MB)
Search_Results(2.640 MB)

sequest_params0
ProteinProphet_file(23.466 KB)

README
enrichment for soluble proteins; Goo et al., 2003, Mol Cell Proteomics 2(8):505 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000173 yagsn1_1120rpt Halobacterium mzXML_format(16.302 MB)
Search_Results(4.933 MB)

sequest_params0
ProteinProphet_file(31.172 KB)

README
replicate enrichment for soluble proteins; 1100-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):506 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000220 yagsn1_48rpt Halobacterium mzXML_format(14.173 MB)
Search_Results(6.553 MB)

sequest_params0
ProteinProphet_file(35.322 KB)

README
replicate enrichment for soluble proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):507 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000210 yagsn1_712rpt Halobacterium mzXML_format(14.007 MB)
Search_Results(6.537 MB)

sequest_params0
ProteinProphet_file(34.838 KB)

README
replicate enrichment for soluble proteins; 700-1200 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):508 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000249 yagsn1_YAGsn2 Halobacterium mzXML_format(11.211 MB)
Search_Results(2.716 MB)

sequest_params0
ProteinProphet_file(22.750 KB)

README
replicate enrichment for soluble proteins; Goo et al., 2003, Mol Cell Proteomics 2(8):509 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000181 yagsn2_1120rpt Halobacterium mzXML_format(16.118 MB)
Search_Results(4.991 MB)

sequest_params0
ProteinProphet_file(29.443 KB)

README
replicate enrichment for soluble proteins; 1100-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):510 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000218 YAGsn2_48rpt Halobacterium mzXML_format(13.540 MB)
Search_Results(6.510 MB)

sequest_params0
ProteinProphet_file(32.623 KB)

README
replicate enrichment for soluble proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):511 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000241 yagsn2_712rpt Halobacterium mzXML_format(14.106 MB)
Search_Results(6.437 MB)

sequest_params0
ProteinProphet_file(31.061 KB)

README
replicate enrichment for soluble proteins; 700-1200 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):512 Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000209 YAGwall Halobacterium mzXML_format(12.146 MB)
Search_Results(2.071 MB)

sequest_params0
ProteinProphet_file(12.674 KB)

README
enrichment for Halobacterium cell wall proteins, Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000254 yagwall_1120rpt Halobacterium mzXML_format(22.481 MB)
Search_Results(1.848 MB)

sequest_params0
ProteinProphet_file(17.272 KB)

README
enrichment for Halobacterium cell wall proteins; 1100-2000 m/z; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000205 yagwall_48rpt Halobacterium mzXML_format(12.672 MB)
Search_Results(4.596 MB)

sequest_params0
ProteinProphet_file(27.814 KB)

README
enrichment for Halobacterium cell wall proteins; 400-800m/z; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000225 yagwall_712rpt Halobacterium mzXML_format(16.645 MB)
Search_Results(3.114 MB)

sequest_params0
ProteinProphet_file(26.659 KB)

README
enrichment for Halobacterium cell wall proteins; 700-1200 m/z; Goo et al., unpublished data. Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng Goo et al. (2003)
PAe000330 01_glyco Human mzXML_format(1.047 GB)
RAW_format(972.910 MB)

Search_Results(52.147 MB)

ProteinProphet_file(338.156 KB)

README
01_glyco Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000032 031003_BALF2 Human mzXML_format(238.532 MB)
Search_Results(173.422 MB)

sequest_params0
ProteinProphet_file(357.113 KB)

README
Human bronchoalveolar lavage fluid Samuel Donohoe, Lynn Schnapp (UW/Harborview) Schnapp et al. (2006)
PAe000033 032403_BALF4_glypep Human mzXML_format(71.987 MB)
Search_Results(73.040 MB)

sequest_params0
ProteinProphet_file(102.618 KB)

README
Human bronchoalveolar lavage fluid Samuel Donohoe, Lynn Schnapp (UW/Harborview) Schnapp et al. (2006)
PAe000034 041803_BALF3 Human mzXML_format(641.071 MB)
Search_Results(157.988 MB)

sequest_params0
ProteinProphet_file(823.896 KB)

README
Human bronchoalveolar lavage fluid Samuel Donohoe, Lynn Schnapp (UW/Harborview) Schnapp et al. (2006)
PAe000035 050603_BALF11 Human mzXML_format(597.240 MB)
Search_Results(361.016 MB)

sequest_params0
ProteinProphet_file(407.913 KB)

README
Human bronchoalveolar lavage fluid Samuel Donohoe, Lynn Schnapp (UW/Harborview) Schnapp et al. (2006)
PAe000036 051503_BAL20_gly_hui Human mzXML_format(21.786 MB)
Search_Results(17.191 MB)

sequest_params0
ProteinProphet_file(55.464 KB)

README
Human bronchoalveolar lavage fluid Samuel Donohoe, Lynn Schnapp (UW/Harborview) Schnapp et al. (2006)
PAe000037 051503_BAL20_gly_lec Human mzXML_format(65.963 MB)
Search_Results(39.348 MB)

sequest_params0
ProteinProphet_file(88.685 KB)

README
Human bronchoalveolar lavage fluid Sam Donohoe, Lynn Schnapp(UW) et al. Schnapp et al. (2006)
PAe000331 15_clinprot_c3 Human mzXML_format(454.112 MB)
RAW_format(452.659 MB)

Search_Results(117.181 MB)

ProteinProphet_file(732.145 KB)

README
15_clinprot_c3 Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000338 16_clinprot_c8 Human mzXML_format(558.464 MB)
RAW_format(515.598 MB)

Search_Results(117.781 MB)

ProteinProphet_file(682.391 KB)

README
16_clinprot_c8 Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000332 17_wcx Human mzXML_format(778.227 MB)
RAW_format(724.203 MB)

Search_Results(143.451 MB)

ProteinProphet_file(824.915 KB)

README
17_wcx Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000335 18_size Human mzXML_format(660.408 MB)
RAW_format(545.000 MB)

Search_Results(138.946 MB)

ProteinProphet_file(485.835 KB)

README
18_size Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000333 19_proteinag Human mzXML_format(544.678 MB)
RAW_format(503.578 MB)

Search_Results(124.483 MB)

ProteinProphet_file(401.187 KB)

README
19_proteinag Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000334 20_cys Human mzXML_format(775.742 MB)
RAW_format(716.013 MB)

Search_Results(119.577 MB)

ProteinProphet_file(430.907 KB)

README
20_cys Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000337 21_unfract Human mzXML_format(442.372 MB)
RAW_format(413.615 MB)

Search_Results(73.709 MB)

ProteinProphet_file(476.964 KB)

README
21_unfract Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000336 22_mars Human mzXML_format(656.933 MB)
RAW_format(609.736 MB)

Search_Results(196.441 MB)

ProteinProphet_file(895.899 KB)

README
22_mars Amanda Paulovich Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000114 A8_IP Human mzXML_format(515.930 MB)
RAW_format(461.973 MB)

Search_Results(611.946 MB)

sequest_params0
ProteinProphet_file(3.340 MB)

README
Human Erythroleukemia K562 cell line Katherine Resing (U Col), Meyer-Arendt K, Mendoza AM, Aveline-Wolf LD Jonscher KR, Pierce KG, Old WM, Cheung HT, Russell S, Wattawa JL, Goehle GR, Knight RD, Ahn NG. Resing et al. 2004, Anal Chem. 2004 Jul 1;76(13):3556-68.
PAe000112 AdducinII Human mzXML_format(23.110 MB)
Search_Results(27.373 MB)

sequest_params0
ProteinProphet_file(140.666 KB)

README
Purified Human Adducin protein Dan Martin
PAe000071 b1-CIT_glyco_lcq Human mzXML_format(1.156 GB)
Search_Results(315.681 MB)

ProteinProphet_file(242.440 KB)

README
HUPO sample b1-CIT glycopeptide HUPO Lab 2 is Aebersold Lab, Institute for Systems Biology, Seattle, WA Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000072 b1-CIT_glyco_qstar Human mzXML_format(11.236 MB)
Search_Results(19.590 MB)

ProteinProphet_file(131.636 KB)

README
HUPO sample b1-CIT glycopeptide HUPO Lab 2 is Aebersold Lab, Institute for Systems Biology, Seattle, WA Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000014 Caco2vsEcoli Human mzXML_format(552.252 MB)
RAW_format(22.606 MB)

Search_Results(467.718 MB)

sequest_params0
ProteinProphet_file(1.213 MB)

README
Human Caco-2 intestinal epithelial cell line; labeled with CL-ICAT; IPI Sam Donohoe Hardwidge PR, et al. 2004, J Biol Chem. 279(19):20127-36.
PAe000044 Cytoskeleton Human mzXML_format(319.720 MB)
Search_Results(270.371 MB)

sequest_params0
ProteinProphet_file(606.890 KB)

README
Human red blood cells Dan Martin
PAe000314 hair-ucd_hr_cam Human mzXML_format(797.699 MB)
RAW_format(713.985 MB)

Search_Results(338.594 MB)

sequest_params0
ProteinProphet_file(1.075 MB)

README
Human Hair Sample HR Y Lee
PAe000311 hair-ucd_jy_cam Human mzXML_format(374.549 MB)
RAW_format(338.087 MB)

Search_Results(319.310 MB)

sequest_params0
ProteinProphet_file(1.260 MB)

README
Human Hair Sample JY Y Lee
PAe000315 hair-ucd_sm_cam Human mzXML_format(363.345 MB)
RAW_format(327.739 MB)

Search_Results(314.179 MB)

sequest_params0
ProteinProphet_file(1.258 MB)

README
Human Hair Sample SM Y Lee
PAe000021 HFHp100IFN Human mzXML_format(291.308 MB)
RAW_format(259.956 MB)

Search_Results(114.277 MB)

sequest_params0
ProteinProphet_file(262.288 KB)

README
CL-ICAT, IPI, IFN treatment on liver cells: Membrane fraction (P100) of HFH cells +/- IFN Wei Yan, Michael G. Katze Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000022 HFHp3IFN Human mzXML_format(308.536 MB)
RAW_format(277.909 MB)

Search_Results(111.085 MB)

sequest_params0
ProteinProphet_file(416.845 KB)

README
CL-ICAT, IFN treatment on liver cells: Nuclear fraction (P3) of HFH cells +/- IFN Wei Yan, Nelson Fausto Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000023 HFHs100IFN Human mzXML_format(2.132 GB)
RAW_format(1.918 GB)

Search_Results(1.388 GB)

sequest_params0
ProteinProphet_file(1.604 MB)

README
CL-ICAT, IFN treatment on liver cells: Cytosolic fraction (S100) of Huh7 cells +/- IFN Wei Yan, Nelson Fausto Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000276 HsPlasma_tryp_alkylated Human mzXML_format(1.311 GB)
raw_format(1.179 GB)

Search_Results(431.052 MB)

ProteinProphet_file(2.032 MB)

README
Qian Plasma alkylated samples Weijun Qian
PAe000278 HsPlasma_tryp_nonalkylated Human mzXML_format(5.929 GB)
RAW_format(1.145 GB)

Search_Results(1.784 GB)

ProteinProphet_file(3.120 MB)

README
Qian Plasma non alkylated samples Weijun Qian
PAe000011 Huh7-P100_IFN Human mzXML_format(656.355 MB)
RAW_format(588.149 MB)

Search_Results(443.806 MB)

sequest_params0
ProteinProphet_file(508.202 KB)

README
Interferon (IFN) treatment on liver cells: Membrane fraction (P100) of Huh7 cells +/- IFN. ICAT. Wei Yan, Michael G. Katze Yan, W. et al. (2004) Genome Biology 2004, 5:R54
Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000012 Huh7-P3_IFN Human mzXML_format(523.710 MB)
Search_Results(247.307 MB)

sequest_params0
ProteinProphet_file(803.540 KB)

README
IFN treatment on liver cells: Nuclear fraction (P3) of Huh7 cells +/- IFN Wei Yan, Michael G. Katze Yan, W. et al. (2004) Genome Biology 2004, 5:R54
Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000013 Huh7-S100_IFN Human mzXML_format(631.632 MB)
RAW_format(566.591 MB)

Search_Results(455.590 MB)

sequest_params0
ProteinProphet_file(815.779 KB)

README
IFN treatment on liver cells: Cytosolic fraction (S100) of Huh7 cells +/- IFN Wei Yan, Michael G. Katze Yan, W. et al. (2004) Genome Biology 2004, 5:R54
Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000097 HUPO12_run31 Human mzXML_format(31.025 MB)
dtapack_format(30.379 MB)

Search_Results(27.367 MB)

ProteinProphet_file(145.507 KB)

README
HUPO plasma sample HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000098 HUPO12_run32 Human mzXML_format(34.667 MB)
dtapack_format(34.822 MB)

Search_Results(30.126 MB)

ProteinProphet_file(145.383 KB)

README
HUPO plasma sample HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000099 HUPO12_run33 Human mzXML_format(43.817 MB)
dtapack_format(48.141 MB)

Search_Results(26.350 MB)

ProteinProphet_file(222.778 KB)

README
HUPO plasma sample HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000100 HUPO12_run34 Human mzXML_format(22.363 MB)
dtapack_format(19.623 MB)

Search_Results(21.426 MB)

ProteinProphet_file(130.509 KB)

README
HUPO plasma sample HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000096 HUPO22_M_CA_S Human mzXML_format(2.384 GB)
RAW_format(2.139 GB)

Search_Results(287.868 MB)

ProteinProphet_file(1.059 MB)

README
HUPO plasma sample HUPO Lab 22 is Paik, Yonsei Proteome Research Center, Seoul, Korea Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000058 HUPO28_b1-CIT Human mzXML_format(8.126 MB)
RAW_format(7.296 MB)

Search_Results(4.015 MB)

ProteinProphet_file(106.856 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000059 HUPO28_b1-SERUM Human mzXML_format(8.245 MB)
RAW_format(7.402 MB)

Search_Results(4.252 MB)

ProteinProphet_file(117.602 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000060 HUPO28_b2-CIT Human mzXML_format(40.941 MB)
RAW_format(36.676 MB)

Search_Results(13.537 MB)

ProteinProphet_file(178.286 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000061 HUPO28_b2-SERUM Human mzXML_format(41.445 MB)
RAW_format(37.137 MB)

Search_Results(13.396 MB)

ProteinProphet_file(178.599 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000062 HUPO28_b3-CIT Human mzXML_format(8.303 MB)
RAW_format(7.453 MB)

Search_Results(4.112 MB)

ProteinProphet_file(118.499 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000063 HUPO28_b3-SERUM Human mzXML_format(8.095 MB)
RAW_format(7.267 MB)

Search_Results(4.160 MB)

ProteinProphet_file(123.853 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000065 HUPO28_Ref-SERUM Human mzXML_format(7.751 MB)
RAW_format(6.963 MB)

Search_Results(3.883 MB)

ProteinProphet_file(97.586 KB)

README
HUPO plasma sample HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000066 HUPO29_b1-CIT_1 Human mzXML_format(278.690 MB)
RAW_format(340.296 MB)

Search_Results(101.474 MB)

ProteinProphet_file(524.686 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000067 HUPO29_b1-CIT_win1 Human mzXML_format(164.164 MB)
RAW_format(148.471 MB)

Search_Results(89.821 MB)

ProteinProphet_file(548.546 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000068 HUPO29_b1-CIT_win2 Human mzXML_format(133.025 MB)
RAW_format(121.476 MB)

Search_Results(80.931 MB)

ProteinProphet_file(363.814 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000130 HUPO29_b1-EDTA_1 Human mzXML_format(365.826 MB)
RAW_format(330.980 MB)

Search_Results(99.202 MB)

ProteinProphet_file(379.241 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000131 HUPO29_b1-EDTA_win1 Human mzXML_format(196.343 MB)
RAW_format(177.427 MB)

Search_Results(92.010 MB)

ProteinProphet_file(551.892 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000132 HUPO29_b1-EDTA_win2 Human mzXML_format(142.211 MB)
RAW_format(139.679 MB)

Search_Results(73.009 MB)

ProteinProphet_file(394.933 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000133 HUPO29_b1-HEP Human mzXML_format(313.319 MB)
RAW_format(283.029 MB)

Search_Results(85.186 MB)

ProteinProphet_file(363.977 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000134 HUPO29_b1-SERUM Human mzXML_format(352.195 MB)
RAW_format(318.284 MB)

Search_Results(98.979 MB)

ProteinProphet_file(463.618 KB)

README
HUPO plasma sample HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000069 HUPO34 Human mzXML_format(1.270 GB)
RAW_format(1.142 GB)

Search_Results(222.195 MB)

ProteinProphet_file(1.088 MB)

README
HUPO plasma sample HUPO Lab 34 is Speicher, Wistar Institute, Philadelphia, PA, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000135 HUPO34_b1-SERUM Human mzXML_format(8.329 GB)
RAW_format(7.746 GB)

Search_Results(963.062 MB)

ProteinProphet_file(3.338 MB)

README
HUPO plasma sample HUPO LAb 34 is Speicher, Wistar Institute, Philadelphia, PA, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000070 HUPO37_b1-HEP_2LCQ Human mzXML_format(81.385 MB)
RAW_format(72.688 MB)

Search_Results(2.980 MB)

ProteinProphet_file(41.803 KB)

README
HUPO plasma sample HUPO Lab 37 is Tsugita/Hosokawa, Proteomics Research Lab, Tsukuba, Japan Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000101 HUPO40 Human mzXML_format(973.868 MB)
RAW_format(875.006 MB)

Search_Results(70.936 MB)

ProteinProphet_file(514.624 KB)

README
HUPO plasma sample HUPO Lab 40 is Wang R, Mass Spec Proteomics Lab, Mount Sinai, New York, NY, USA Omenn et al, Proteomics 2005; 5: 3226-3245
PAe000040 ICAT-3A-P3 Human mzXML_format(431.786 MB)
Search_Results(241.719 MB)

sequest_params0
ProteinProphet_file(141.866 KB)

README
chromatin-associated proteins induced by Myc oncoprotein expression in human B lymphocytes. Chromatin-enriched fractions labeled with ICAT. Yuzuru Shiio Shiio et al. 2003, J Am Soc Mass Spectrom. 2003 Jul;14(7):696-703.
PAe000041 ICAT-3A-S1 Human mzXML_format(993.935 MB)
Search_Results(396.745 MB)

sequest_params0
ProteinProphet_file(724.335 KB)

README
soluble fractions Yuzuru Shiio
PAe000042 ICAT-3B-P3 Human mzXML_format(443.468 MB)
Search_Results(193.181 MB)

sequest_params0
ProteinProphet_file(396.406 KB)

README
chromatin-enriched fractions. labeled with old ICAT. Yuzuru Shiio
PAe000043 ICAT-3B-S1 Human mzXML_format(1.882 GB)
Search_Results(563.844 MB)

sequest_params0
ProteinProphet_file(948.883 KB)

README
soluble fractions. labeled with old ICAT. Yuzuru Shiio
PAe000051 lgmem2 Human mzXML_format(542.774 MB)
RAW_format(485.421 MB)

Search_Results(303.043 MB)

sequest_params0
ProteinProphet_file(1.376 MB)

README
Human prostate cancer cell line: LNCaP (membrane); Microsomal preparation. Labeled with old ICAT. Michael Wright Wright ME et al. 2003. Genome Biol.;5(1):R4
PAe000005 LNCALcyto Human mzXML_format(521.042 MB)
Search_Results(142.141 MB)

sequest_params0
ProteinProphet_file(491.791 KB)

README
Human prostate cancer cell lines: LNCaP, CL-1, cytosolic. labeled with old ICAT Biaoyang Lin, Lee Hood Lin et al. 2005, Cancer Res. 2005 Apr 15;65(8):3081-91
PAe000006 LNCALmicrosomal Human mzXML_format(427.986 MB)
Search_Results(129.332 MB)

sequest_params0
ProteinProphet_file(443.738 KB)

README
Human prostate cancer cell lines: LNCaP, CL-1, microsomal. Labeled with old ICAT. Biaoyang Lin, Lee Hood Lin et al. 2005, Cancer Res. 2005 Apr 15;65(8):3081-91
PAe000007 LNCALnucl Human mzXML_format(605.765 MB)
Search_Results(139.726 MB)

sequest_params0
ProteinProphet_file(464.775 KB)

README
Human prostate cancer cell lines: LNCaP, CL-1, nuclear. Labeled with old ICAT. Biaoyang Lin, Lee Hood Lin et al. 2005, Cancer Res. 2005 Apr 15;65(8):3081-91
PAe000073 NIBSC_glyco_lcq Human mzXML_format(1.283 GB)
Search_Results(348.893 MB)

ProteinProphet_file(464.634 KB)

README
HUPO sample NIBSC glycopeptide HUPO Lab 2 is Aebersold Lab, Institute for Systems Biology, Seattle, WA Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000038 OPDHumanSiHa Human mzXML_format(102.000 MB)
RAW_format(91.100 MB)

Search_Results(135.331 MB)

sequest_params0
ProteinProphet_file(378.686 KB)

README
SiHa human cell line used to model cervical cancer. Grown under normal conditions. No perturbation. RPC chromatography. ThermoFinnigan ESI-Ion Trap "Dexa XP Plus. Mike Carlson (U Texas) Prince, J, Carlson, M, Wang, R, Lu, P, and Marcotte E, 2004 Nature Biotechnology, 22(4):471
PAe000039 OPDHumanSqCC Human mzXML_format(116.509 MB)
RAW_format(103.806 MB)

Search_Results(135.549 MB)

sequest_params0
ProteinProphet_file(397.737 KB)

README
SqCC human cell line used to model head and neck cancer. Grown under normal conditions. No perturbation. Mike Carlson (U Texas) Prince, J, Carlson, M, Wang, R, Lu, P, and Marcotte E, 2004 Nature Biotechnology, 22(4):471
PAe000115 PLC Human mzXML_format(71.495 MB)
RAW_format(64.552 MB)

Search_Results(64.450 MB)

sequest_params0
ProteinProphet_file(481.375 KB)

README
Human Erythroleukemia K562 cell line Katherine Resing (U Col), Meyer-Arendt K, Mendoza AM, Aveline-Wolf LD Jonscher KR, Pierce KG, Old WM, Cheung HT, Russell S, Wattawa JL, Goehle GR, Knight RD, Ahn NG. Resing et al. 2004, Anal Chem. 2004 Jul 1;76(13):3556-68.
PAe000116 Q Human mzXML_format(2.518 GB)
RAW_format(2.257 GB)

Search_Results(4.043 GB)

sequest_params0
ProteinProphet_file(9.293 MB)

README
Human Katherine Resing (U Col), Meyer-Arendt K, Mendoza AM,
PAe000168 Qian Human mzXML_format(5.929 GB)
Search_Results(5.604 GB)

sequest_params0
ProteinProphet_file(5.020 MB)

README
Qian Plasma non alkylated samples Weijun Qian (PNNL) Qian et al., Mol Cell Proteomics. 2005 May;4(5):700-9
PAe000169 Qian_WQ Human mzXML_format(1.311 GB)
Search_Results(1.271 GB)

sequest_params0
ProteinProphet_file(20.537 MB)

README
Qian Plasma alkylated samples Weijun Qian et al. (PNNL) Qian et al., Mol Cell Proteomics. 2005 May;4(5):700-9
PAe000312 R Human mzXML_format(2.004 GB)
RAW_format(1.814 GB)

Search_Results(3.849 GB)

sequest_params0
ProteinProphet_file(5.843 MB)

README
R Katheryn Resing
PAe000002 raftapr Human mzXML_format(264.600 MB)
Search_Results(156.432 MB)

sequest_params0
ProteinProphet_file(378.129 KB)

README
Lipid Rafts prepared from Human Jurkat T-cell stimulated via T cell receptor/CD28 cross-linking and from control (unstimulated) cells. Labeled with old ICAT. Priska von Haller, Eugene Yi, Samuel Donohoe, Julian Watts.
PAe000003 raftaug Human mzXML_format(141.161 MB)
Search_Results(59.702 MB)

sequest_params0
ProteinProphet_file(241.798 KB)

README
Lipid Rafts prepared from Human Jurkat T-cell stimulated via T cell receptor/CD28 cross-linking and from control (unstimulated) cells. Labeled with old ICAT. Priska von Haller, Eugene Yi, Samuel Donohoe, Julian Watts von Haller et al. 2003 Mol Cell Proteomics 2, 428-442
von Haller et al. 2003, Mol Cell Proteomics. 2003 Jul;2(7):426-7.
PAe000004 raftflow Human mzXML_format(396.112 MB)
Search_Results(217.996 MB)

sequest_params0
ProteinProphet_file(974.764 KB)

README
Flow through sample of Lipid Rafts prepared from Human Jurkat T-cell stimulated via T cell receptor/CD28 cross-linking and from control (unstimulated) cells. Labeled with old ICAT. Priska von Haller, Eugene Yi, Samuel Donohoe, Julian Watts von Haller et al. 2003 Mol Cell Proteomics 2, 428-442
von Haller et al. 2003, Mol Cell Proteomics. 2003 Jul;2(7):426-7.
PAe000026 Trex_1 Human mzXML_format(1.077 GB)
Search_Results(207.356 MB)

sequest_params0
ProteinProphet_file(969.903 KB)

README
For identification of the TREX binding factor, two samples were prepared by DNA affinity chromatography using HeLa nuclear extracts. The first sample was purified using a TREX binding site column. The second sample was prepared using a mutated TREX binding site column. Proteins were differentially labeled with old ICAT reagents , combined, prepared for mass spectrometry, and analyzed on an ion trap mass spectrometer. Jeff Ranish Himeda et al. 2004, Mol Cell Biol. 2004 Mar;24(5):2132-43
PAe000316 Wilmarth_human_lens Human mzXML_format(208.573 MB)
RAW_format(186.846 MB)

Search_Results(211.277 MB)

sequest_params0
ProteinProphet_file(545.920 KB)

README
Human lens experiment from P Wilmarth Phillip Wilmarth
PAe000317 Wilmarth_human_saliva Human mzXML_format(170.154 MB)
RAW_format(153.909 MB)

Search_Results(93.407 MB)

sequest_params0
ProteinProphet_file(369.589 KB)

README
Human saliva experiment from P Wilmarth Phillip Wilmarth
PAe000318 Wilmarth_human_saliva2 Human mzXML_format(622.824 MB)
RAW_format(559.267 MB)

Search_Results(582.064 MB)

sequest_params0
ProteinProphet_file(1.302 MB)

README
Human saliva 2 experiment from P Wilmarth Phillip Wilmarth
PAe000274 Wilmarth_human_serum1 Human mzXML_format(188.363 MB)
RAW_format(169.157 MB)

Search_Results(39.186 MB)

ProteinProphet_file(564.714 KB)

README
Human serum experiment from P Wilmarth Phillip Wilmarth
PAe000373 Brain_Cyto_UT Mouse mzXML_format(1.354 GB)
RAW_format(1.210 GB)

Search_Results(223.943 MB)

ProteinProphet_file(1.699 MB)

README
Brain Cytoplasmic Fraction - UT Andrew Emili
PAe000305 brain_micro Mouse mzXML_format(41.198 MB)
RAW_format(36.623 MB)

Search_Results(6.700 MB)

sequest_params0
ProteinProphet_file(193.499 KB)

README
Mouse Brain Microsomal Daniel Martin
PAe000370 Brain_Micro_UT Mouse mzXML_format(1.083 GB)
RAW_format(970.668 MB)

Search_Results(189.226 MB)

ProteinProphet_file(1.455 MB)

README
Brain Microsomal Fraction - UT Andrew Emili
PAe000359 Brain_Mito_UT Mouse mzXML_format(1.346 GB)
RAW_format(1.203 GB)

Search_Results(251.460 MB)

ProteinProphet_file(1.602 MB)

README
Brain Mitochondrial Fraction - UT Andrew Emili
PAe000380 Brain_NUC_UT Mouse mzXML_format(1.378 GB)
RAW_format(1.235 GB)

Search_Results(237.360 MB)

ProteinProphet_file(1.919 MB)

README
Brain Nuclear Fraction - UT Andrew Emili
PAe000272 BrainOctylGlucLTQ Mouse mzXML_format(312.364 MB)
RAW_format(293.201 MB)

Search_Results(30.676 MB)

sequest_params0
ProteinProphet_file(709.027 KB)

README
Mouse brain octyl glucose fraction run on LTQ Dan Martin
PAe000273 BrainOctylSolLCQ Mouse mzXML_format(234.184 MB)
RAW_format(208.466 MB)

Search_Results(11.389 MB)

sequest_params0
ProteinProphet_file(261.648 KB)

README
Mouse Brain Octyl soluable fraction on LCQ Dan Martin
PAe000268 BrainWaterSolLCQ Mouse mzXML_format(622.969 MB)
RAW_format(557.292 MB)

Search_Results(54.583 MB)

sequest_params0
ProteinProphet_file(904.868 KB)

README
Mouse brain soluable fraction on LCQ Dan Martin
PAe000271 BrainWaterSolLTQ Mouse mzXML_format(1.268 GB)
RAW_format(1.185 GB)

Search_Results(110.288 MB)

sequest_params0
ProteinProphet_file(1.364 MB)

README
Mouse brain water soluable fraction run on LTQ Dan Martin
PAe000293 cytoplasmic_2004-07-27 Mouse mzXML_format(149.154 MB)
Search_Results(35.279 MB)

sequest_params0
ProteinProphet_file(423.401 KB)

README
cytoplasmic_2004-07-27 Rong Wang
PAe000292 cytoplasmic_2004-07-28 Mouse mzXML_format(140.445 MB)
Search_Results(34.096 MB)

sequest_params0
ProteinProphet_file(396.586 KB)

README
cytoplasmic_2004-07-28 Rong Wang
PAe000290 cytoplasmic_2004-07-30 Mouse mzXML_format(135.623 MB)
Search_Results(33.808 MB)

sequest_params0
ProteinProphet_file(348.817 KB)

README
cytoplasmic_2004-07-30 Rong Wang
PAe000298 cytoplasmic_2004-09-28 Mouse mzXML_format(130.938 MB)
Search_Results(34.004 MB)

sequest_params0
ProteinProphet_file(520.823 KB)

README
cytoplasmic_2004-09-28 Rong Wang
PAe000379 Heart_Cyto_UT Mouse mzXML_format(1.060 GB)
RAW_format(948.841 MB)

Search_Results(180.643 MB)

ProteinProphet_file(1.202 MB)

README
Heart Cytoplasmic Fraction - UT Andrew Emili
PAe000303 heart_micro Mouse mzXML_format(45.496 MB)
RAW_format(40.386 MB)

Search_Results(4.691 MB)

sequest_params0
ProteinProphet_file(68.833 KB)

README
Mouse Heart Microsomal Daniel Martin
PAe000354 Heart_Micro_UT Mouse mzXML_format(1.052 GB)
RAW_format(952.588 MB)

Search_Results(171.335 MB)

ProteinProphet_file(1.152 MB)

README
Heart Microsomal Fraction - UT Andrew Emili
PAe000353 Heart_Mito_UT Mouse mzXML_format(1.446 GB)
RAW_format(1.308 GB)

Search_Results(167.247 MB)

ProteinProphet_file(1.353 MB)

README
Heart Mitochondrial Fraction - UT Andrew Emili
PAe000416 her-2_normal Mouse mzXML_format(3.877 GB)
Search_Results(622.709 MB)

sequest_params0
ProteinProphet_file(1.385 MB)

README
Normal Her2neu analysis APaulovich
PAe000418 her-2_tumor Mouse mzXML_format(4.243 GB)
Search_Results(651.944 MB)

sequest_params0
ProteinProphet_file(1.970 MB)

README
Tumor Her2neu analysis APaulovich
PAe000356 her2_normal Mouse mzXML_format(3.877 GB)
Search_Results(1.055 GB)

sequest_params0
ProteinProphet_file(7.458 MB)

README
Normal Her2neu analysis Amanda Paulovich
PAe000377 her2_tumor Mouse mzXML_format(4.243 GB)
Search_Results(1.094 GB)

sequest_params0
ProteinProphet_file(9.181 MB)

README
Tumor Her2neu analysis Amanda Paulovich
PAe000355 Kidney_Cyto_UT Mouse mzXML_format(907.154 MB)
RAW_format(823.033 MB)

Search_Results(155.330 MB)

ProteinProphet_file(1.071 MB)

README
Kidney Cytoplasmic Fraction - UT Andrew Emili
PAe000304 kidney_micro Mouse mzXML_format(195.830 MB)
RAW_format(174.837 MB)

Search_Results(15.818 MB)

sequest_params0
ProteinProphet_file(466.397 KB)

README
Mouse Kidney Microsomal Daniel Martin
PAe000368 Kidney_Micro_UT Mouse mzXML_format(1.158 GB)
RAW_format(1.039 GB)

Search_Results(176.116 MB)

ProteinProphet_file(1.038 MB)

README
Kidney Microsomal Fraction - UT Andrew Emili
PAe000358 Kidney_Mito_UT Mouse mzXML_format(1.011 GB)
RAW_format(915.975 MB)

Search_Results(210.640 MB)

ProteinProphet_file(1.645 MB)

README
Kidney Mitochondrial Fraction - UT Andrew Emili
PAe000360 Kidney_NUC_UT Mouse mzXML_format(1.481 GB)
RAW_format(1.352 GB)

Search_Results(237.556 MB)

ProteinProphet_file(1.745 MB)

README
Kidney Nuclear Fraction - UT Andrew Emili
PAe000269 KidneyAnionEX Mouse mzXML_format(607.559 MB)
RAW_format(575.001 MB)

Search_Results(80.179 MB)

sequest_params0
ProteinProphet_file(977.511 KB)

README
Mouse Kidney soluable fraction on LCQ Dan Martin
PAe000270 KidneyAnionLTQ Mouse mzXML_format(269.552 MB)
RAW_format(252.395 MB)

Search_Results(27.369 MB)

sequest_params0
ProteinProphet_file(438.251 KB)

README
Mouse Kidney anion fraction on LTQ Dan Martin
PAe000364 Liver_Cyto_UT Mouse mzXML_format(991.352 MB)
RAW_format(886.530 MB)

Search_Results(187.196 MB)

ProteinProphet_file(913.716 KB)

README
Liver Cytoplasmic Fraction - UT Andrew Emili
PAe000376 Liver_Micro_UT Mouse mzXML_format(1.059 GB)
RAW_format(973.615 MB)

Search_Results(167.657 MB)

ProteinProphet_file(930.058 KB)

README
Liver Microsomal Fraction - UT Andrew Emili
PAe000369 Liver_Mito_UT Mouse mzXML_format(990.088 MB)
RAW_format(885.619 MB)

Search_Results(221.367 MB)

ProteinProphet_file(1.509 MB)

README
Liver Mitochondrial Fraction - UT Andrew Emili
PAe000372 Liver_NE_UT Mouse mzXML_format(200.258 MB)
RAW_format(178.511 MB)

Search_Results(14.167 MB)

ProteinProphet_file(461.537 KB)

README
Liver NE fraction - UT Andrew Emili
PAe000375 Liver_NUC_UT Mouse mzXML_format(1.346 GB)
RAW_format(1.229 GB)

Search_Results(240.782 MB)

ProteinProphet_file(1.477 MB)

README
Liver Nuclear Fraction - UT Andrew Emili
PAe000362 Lung_Cyto_UT Mouse mzXML_format(1.107 GB)
RAW_format(999.813 MB)

Search_Results(242.797 MB)

ProteinProphet_file(1.332 MB)

README
Lung Cytoplasmic Fraction - UT Andrew Emili
PAe000363 Lung_Micro_UT Mouse mzXML_format(1.061 GB)
RAW_format(963.908 MB)

Search_Results(199.845 MB)

ProteinProphet_file(1.985 MB)

README
Lung Microsomal Fraction - UT Andrew Emili
PAe000357 Lung_Mito_UT Mouse mzXML_format(1.310 GB)
RAW_format(1.170 GB)

Search_Results(212.030 MB)

ProteinProphet_file(2.135 MB)

README
Lung Mitochondrial Fraction - UT Andrew Emili
PAe000371 Lung_NE_UT Mouse mzXML_format(727.303 MB)
RAW_format(648.278 MB)

Search_Results(138.257 MB)

ProteinProphet_file(1.977 MB)

README
Lung NE fraction - UT Andrew Emili
PAe000374 Lung_NUC_UT Mouse mzXML_format(734.957 MB)
RAW_format(655.984 MB)

Search_Results(92.494 MB)

ProteinProphet_file(1.131 MB)

README
Lung Nuclear Fraction - UT Andrew Emili
PAe000297 MannMouseLiver Mouse mzXML_format(1.702 KB)
RAW_format(1.707 KB)

Search_Results(1.064 GB)

ProteinProphet_file(6.258 MB)

README
Mann Mouse Liver Matthias Mann
PAe000289 mm_dba2_cyto Mouse mzXML_format(372.309 MB)
RAW_format(332.988 MB)

Search_Results(59.659 MB)

sequest_params0
ProteinProphet_file(1.462 MB)

README
Mouse DBA2 Cyto Daniel Martin
PAe000291 mm_dba2_HMP Mouse mzXML_format(715.244 MB)
RAW_format(639.163 MB)

Search_Results(92.828 MB)

sequest_params0
ProteinProphet_file(2.030 MB)

README
Mouse DBA2 HMP Daniel Martin
PAe000295 mm_dba2_micro Mouse mzXML_format(341.470 MB)
RAW_format(305.790 MB)

Search_Results(69.238 MB)

sequest_params0
ProteinProphet_file(1.642 MB)

README
Mouse DBA2 Micro Daniel Martin
PAe000301 mm_dba2_nucleus Mouse mzXML_format(485.040 MB)
RAW_format(436.497 MB)

Search_Results(76.096 MB)

sequest_params0
ProteinProphet_file(1.649 MB)

README
Mouse DBA2 Nucleus Daniel Martin
PAe000288 mm_liver_organelle Mouse mzXML_format(659.131 MB)
RAW_format(458.650 MB)

Search_Results(55.956 MB)

sequest_params0
ProteinProphet_file(824.914 KB)

README
Mouse Liver Organelle Daniel Martin
PAe000308 mm_liver_organelle-20_9-10 Mouse mzXML_format(107.843 MB)
RAW_format(97.284 MB)

Search_Results(21.180 MB)

sequest_params0
ProteinProphet_file(405.436 KB)

README
Mouse Liver Organelle 20_9-10 Daniel Martin
PAe000309 mm_liver_organelle-25_1 Mouse mzXML_format(376.376 MB)
RAW_format(349.641 MB)

Search_Results(32.508 MB)

sequest_params0
ProteinProphet_file(290.735 KB)

README
Mouse Liver Organelle 25_1 Daniel Martin
PAe000306 mm_liver_organelle-pre7 Mouse mzXML_format(135.712 MB)
RAW_format(121.024 MB)

Search_Results(9.997 MB)

sequest_params0
ProteinProphet_file(247.593 KB)

README
Mouse Liver Organelle pre7 Daniel Martin
PAe000300 mm_testes Mouse mzXML_format(1.265 GB)
RAW_format(1.136 GB)

Search_Results(213.588 MB)

sequest_params0
ProteinProphet_file(2.521 MB)

README
Mouse testes Daniel Martin
PAe000320 MmPlasIPAS11_LateStgPaCa Mouse mzXML_format(47.204 GB)
Search_Results(413.896 MB)

ProteinProphet_file(1.922 MB)

README
MmPlasma IPAS11 late stage pancreatic cancer vs normal Sam Hanash
PAe000323 MmPlasIPAS14_LateStgCaCo_Hvd Mouse mzXML_format(15.883 GB)
Search_Results(369.538 MB)

ProteinProphet_file(1.948 MB)

README
MmPlasma IPAS14 late stage colon cancer vs normal Harvard Sam Hanash
PAe000322 MmPlasIPAS17_LateStgOvCa Mouse mzXML_format(28.447 GB)
Search_Results(481.215 MB)

ProteinProphet_file(1.480 MB)

README
MmPlasma IPAS17 late stage ovarian cancer vs normal Sam Hanash
PAe000321 MmPlasIPAS20_2_LateStgBrCa Mouse mzXML_format(31.849 GB)
Search_Results(669.399 MB)

ProteinProphet_file(2.414 MB)

README
MmPlasma IPAS20_2 late stage breast cancer vs normal Sam Hanash
PAe000302 nuclear_2004-09-20 Mouse mzXML_format(120.768 MB)
Search_Results(32.342 MB)

sequest_params0
ProteinProphet_file(432.826 KB)

README
nuclear_2004-09-20 Rong Wang
PAe000299 nuclear_2004-09-21 Mouse mzXML_format(117.688 MB)
Search_Results(32.118 MB)

sequest_params0
ProteinProphet_file(400.479 KB)

README
nuclear_2004-09-21 Rong Wang
PAe000294 nuclear_2004-09-23 Mouse mzXML_format(117.920 MB)
Search_Results(31.543 MB)

sequest_params0
ProteinProphet_file(401.791 KB)

README
nuclear_2004-09-23 Rong Wang
PAe000296 nuclear_2004-09-24 Mouse mzXML_format(117.446 MB)
Search_Results(31.945 MB)

sequest_params0
ProteinProphet_file(452.366 KB)

README
nuclear_2004-09-24 Rong Wang
PAe000382 org_m1 Mouse mzXML_format(552.707 MB)
Search_Results(3.540 MB)

sequest_params0
ProteinProphet_file(60.382 KB)

README
Mock experiment 1 Wei Yan
PAe000378 org_m2 Mouse mzXML_format(539.295 MB)
Search_Results(3.370 MB)

sequest_params0
ProteinProphet_file(56.243 KB)

README
Mock experiment 2 Wei Yan
PAe000365 org_t Mouse mzXML_format(889.307 MB)
Search_Results(3.565 MB)

sequest_params0
ProteinProphet_file(65.797 KB)

README
Thapsigargin-treated experiment Wei Yan
PAe000361 Placenta_Cyto_UT Mouse mzXML_format(1.105 GB)
RAW_format(989.981 MB)

Search_Results(192.003 MB)

ProteinProphet_file(1.383 MB)

README
Placenta Cytoplasmic Fraction - UT Andrew Emili
PAe000366 Placenta_Mito_UT Mouse mzXML_format(1.384 GB)
RAW_format(1.237 GB)

Search_Results(231.528 MB)

ProteinProphet_file(900.356 KB)

README
Placenta Mitochondrial Fraction - UT Andrew Emili
PAe000367 Placenta_NUC_UT Mouse mzXML_format(1.575 GB)
RAW_format(1.406 GB)

Search_Results(232.351 MB)

ProteinProphet_file(1.830 MB)

README
Placenta Nuclear Fraction - UT Andrew Emili
PAe000307 RBC_membrane Mouse mzXML_format(217.346 MB)
RAW_format(192.153 MB)

Search_Results(24.984 MB)

sequest_params0
ProteinProphet_file(379.201 KB)

README
Mouse Red Blood Cell Membranes Daniel Martin
PAe000285 StrepPyogenes_FFE2_LTQ Streptococcus mzXML_format(1.860 GB)
Search_Results(110.027 MB)

sequest_params0
ProteinProphet_file(107.360 KB)

README
Streptococcus pyogenenes FFE LTQ exp Johan Malmstrom
PAe000283 StrepPyogenes_FFE2_LTQ-FT Streptococcus mzXML_format(47.124 MB)
Search_Results(32.878 MB)

sequest_params0
ProteinProphet_file(70.274 KB)

README
Streptococcus pyogenenes FFE LTQ-FT exp Johan Malmstrom
PAe000284 StrepPyogenes_LTQ1_TC Streptococcus mzXML_format(138.493 MB)
Search_Results(120.713 MB)

sequest_params0
ProteinProphet_file(144.453 KB)

README
Streptococcus pyogenenes LTQ TimeCourse Johan Malmstrom
PAe000287 StrepPyogenes_LTQ2_DR_TC Streptococcus mzXML_format(400.273 MB)
Search_Results(272.674 MB)

sequest_params0
ProteinProphet_file(255.823 KB)

README
Streptococcus pyogenenes LTQ DoseResp TimeCourse Johan Malmstrom
PAe000286 StrepPyogenes_OGE_LTQ Streptococcus mzXML_format(2.196 GB)
Search_Results(405.642 MB)

sequest_params0
ProteinProphet_file(372.989 KB)

README
Streptococcus pyogenenes LTQ OffGel Johan Malmstrom
PAe000084 Ac30 Yeast mzXML_format(1.863 GB)
RAW_format(1.669 GB)

Search_Results(218.482 MB)

ProteinProphet_file(1.392 MB)

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Catalogue changes in budding yeast (S. cerevisiae) protein expression following brief treatment with mating hormone, with the endpoint of identifying translationally controlled proteins. baseline (light ICAT label) is protein from an asynchrnous culture Serikawa KA (UW), Xu XL (UW), MacKay VL (UW), Law GL (UW), Zong Q (UW), Zhao LP (UW), Bumgarner R (UW), Morris DR (UW) Serikawa, Xu, MacKay, et al. (2003)
PAe000147 APEX_04-22 Yeast mzXML_format(119.326 MB)
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ProteinProphet_file(356.942 KB)

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04-22-05_YPD041805_N14_14_45_v0.4 Peng Lu
PAe000140 APEX_04-23 Yeast mzXML_format(124.700 MB)
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ProteinProphet_file(294.246 KB)

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04-23-05_YPD041805_N14_14_45_v0.4 Peng Lu (UT)
PAe000156 APEX_04-24 Yeast mzXML_format(109.829 MB)
Search_Results(25.244 MB)

ProteinProphet_file(322.663 KB)

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04-24-05_YPD041805_N14_14_45_v0.4 Peng Lu (UT)
PAe000154 APEX_04-28 Yeast mzXML_format(130.232 MB)
Search_Results(27.761 MB)

ProteinProphet_file(316.855 KB)

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04-28-05_YPD041805_N14_14_45_v0.4 Peng Lu (UT)
PAe000144 APEX_04-30 Yeast mzXML_format(129.948 MB)
Search_Results(28.205 MB)

ProteinProphet_file(302.747 KB)

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04-30-05_YPD041805_N14_14_45_v0.4 Peng Lu (UT)
PAe000146 cdc15_cdc23_newICAT Yeast mzXML_format(977.305 MB)
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ProteinProphet_file(1.047 MB)

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cdc15(light) vs. cdc23(heavy) using the (new) cleavable ICAT reagent Brian Raught (ISB)
PAe000076 cdc15_cdc23_oldICAT Yeast mzXML_format(2.203 GB)
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ProteinProphet_file(947.739 KB)

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S. cerevisiae Brian Raught
PAe000077 cdc15_cdc23_QTOFB Yeast mzXML_format(200.987 MB)
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ProteinProphet_file(330.773 KB)

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S. cerevisiae Brian Raught
PAe000164 cdc23_amf_newICAT Yeast mzXML_format(949.448 MB)
RAW_format(851.667 MB)

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ProteinProphet_file(942.833 KB)

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cdc23(light) vs. alpha mating factor arrest (amf:heavy) with CL-ICAT Brian Raught (ISB)
PAe000141 Comp12vs12sizefrac Yeast mzXML_format(125.053 MB)
RAW_format(116.913 MB)

Search_Results(19.043 MB)

ProteinProphet_file(401.797 KB)

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Comp12vs12sizefrac Dan Martin (ISB)
PAe000125 Comp12vs12standSCX Yeast mzXML_format(137.328 MB)
RAW_format(122.952 MB)

Search_Results(20.144 MB)

ProteinProphet_file(416.985 KB)

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Yeast samples used in testing fraction on LCQ. Dan Martin
PAe000079 contFFE2Murea Yeast mzXML_format(672.407 MB)
RAW_format(166.008 MB)

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ProteinProphet_file(939.221 KB)

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Free flow electrophoresis yeast labeled with acid cleavable ICAT Floyd Kregenow, Ruedi Aebersold
PAe000167 FFEY1 Yeast mzXML_format(485.523 MB)
RAW_format(346.961 MB)

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ProteinProphet_file(306.843 KB)

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FFEYeast 1 Ruedi Aebersold and Floyd Kregenow (ISB)
PAe000081 FFEY1Scx Yeast mzXML_format(41.428 MB)
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ProteinProphet_file(97.307 KB)

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Free flow electrophoresis yeast Floyd Kregenow, Ruedi Aebersold
PAe000161 FFEY2 Yeast mzXML_format(470.140 MB)
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ProteinProphet_file(452.620 KB)

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Free flow electrophoresis yeast test 2 Ruedi Aebersold and Floyd Kregenow (ISB)
PAe000139 gel_msms Yeast mzXML_format(1.498 GB)
RAW_format(1.345 GB)

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ProteinProphet_file(905.211 KB)

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gel_msms Yuen Ho, Albrecht Gruhler, Adrian Heilbut, Gary D. Bader, Lynda Moore,et al. Ho et al. 2002
PAe000151 gricat Yeast mzXML_format(258.719 MB)
RAW_format(177.463 MB)

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ProteinProphet_file(418.212 KB)

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gricat Jeff Ranish, Trey Ideker (ISB) Ideker et al. 2001, Science. 2001 May 4;292(5518):929-34.
PAe000165 ipg_ief Yeast mzXML_format(607.550 MB)
RAW_format(548.499 MB)

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ProteinProphet_file(497.850 KB)

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exp 5: IPG IEF of Multidimensional LC and gel MS/MS study Breci L, Hattrup E, Keeler M, Letarte J, Johnson R, Haynes PA. Breci et al. (2005)
PAe000166 mudpit Yeast mzXML_format(175.498 MB)
RAW_format(158.359 MB)

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ProteinProphet_file(258.673 KB)

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exp 1: mudpit Breci L, Hattrup E, Keeler M, Letarte J, Johnson R, Haynes PA. Breci et al. (2005)
PAe000149 opd00034_YEAST Yeast mzXML_format(107.318 MB)
RAW_format(95.728 MB)

Search_Results(16.425 MB)

ProteinProphet_file(196.850 KB)

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OPD00034 Yeast Peng Lu
PAe000120 opd00035_YEAST Yeast mzXML_format(105.928 MB)
RAW_format(94.484 MB)

Search_Results(16.182 MB)

ProteinProphet_file(204.071 KB)

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DBY8724 yeast cells cultured in YPD medium at 30 deg C (OD600 = 0.8) Peng Lu (UT, Austin) Prince, J, Carlson, M, Wang, R, Lu, P, and Marcotte E, 2004 Nature Biotechnology, 22(4):471
PAe000138 peroximal_clICAT Yeast mzXML_format(901.467 MB)
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ProteinProphet_file(426.936 KB)

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peroximal_clICAT M. Marelli Marelli et al. 2004, J Cell Biol. 2004 Dec 20;167(6):1099-112
PAe000150 peroximalPrep0702 Yeast mzXML_format(669.715 MB)
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ProteinProphet_file(197.363 KB)

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peroximalPrep0702 Marcelli Marelli et al (ISB) Marelli et al. 2004, J Cell Biol. 2004 Dec 20;167(6):1099-112
PAe000083 PeteryeastIcatstdFFE Yeast mzXML_format(3.206 GB)
Search_Results(134.539 MB)

ProteinProphet_file(1.174 MB)

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Free flow electrophoresis yeast labeled with acid cleavable ICAT Floyd Kregenow, Ruedi Aebersold
PAe000128 PvM1 Yeast mzXML_format(58.682 MB)
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ProteinProphet_file(184.674 KB)

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Yeast: identification of peroxisomal proteins with subcellular fractionation and tandem mass spectrometry. ICAT labeled peptides. Marelli M, Smith JJ, Jung S, Yi E, Nesvizhskii AI, Christmas RH, Saleem RA, Tam YY, Fagarasanu A, Goodlett DR, Aebersold R, Rachubinski RA, Aitchison JD. Marelli et al. 2004, J Cell Biol. 2004 Dec 20;167(6):1099-112
PAe000157 pxproteome Yeast mzXML_format(378.660 MB)
Search_Results(20.210 MB)

ProteinProphet_file(276.064 KB)

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peroxisomal proteomics Marcello Marelli et al. (ISB) Marelli et al. 2004, J Cell Biol. 2004 Dec 20;167(6):1099-112
PAe000160 rp_int_selected Yeast mzXML_format(221.897 MB)
RAW_format(200.633 MB)

Search_Results(37.484 MB)

ProteinProphet_file(355.001 KB)

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exp 3: MSMS RP intensity selected of a Multidimensional LC and gel MS/MS study Breci L, Hattrup E, Keeler M, Letarte J, Johnson R, Haynes PA. (University of Arizona) Breci et al. (2005)
PAe000162 rp_mass_selected Yeast mzXML_format(87.141 MB)
RAW_format(77.193 MB)

Search_Results(50.472 MB)

ProteinProphet_file(692.528 KB)

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exp 2: MSMS RP mass selected Breci L, Hattrup E, Keeler M, Letarte J, Johnson R, Haynes PA. Breci et al. (2005)
PAe000158 sdspage Yeast mzXML_format(432.990 MB)
RAW_format(389.209 MB)

Search_Results(66.070 MB)

ProteinProphet_file(483.098 KB)

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exp 4: SDSPAGE Paul Haynes et al. (UT) Breci et al. (2005)
PAe000093 T00 Yeast mzXML_format(1.320 GB)
Search_Results(85.990 MB)

ProteinProphet_file(720.080 KB)

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yeast cell-cycle experiment Mark Flory
PAe000094 T30 Yeast mzXML_format(1.401 GB)
Search_Results(79.650 MB)

ProteinProphet_file(1.099 MB)

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yeast cell-cycle experiment Mark Flory
PAe000095 T50 Yeast mzXML_format(2.157 GB)
Search_Results(97.066 MB)

ProteinProphet_file(750.696 KB)

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yeast cell-cycle experiment Mark Flory
PAe000148 TSAAT000c Yeast mzXML_format(2.064 GB)
Search_Results(192.950 MB)

ProteinProphet_file(1.576 MB)

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TSAA time 0 experiment cleavable ICAT Mark Flory, Ruedi Aebersold et al. (ISB) MacKay et al. (2004)
PAe000086 TSAAT030c Yeast mzXML_format(1.609 GB)
RAW_format(1.442 GB)

Search_Results(216.996 MB)

ProteinProphet_file(1.337 MB)

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TSAA time 30 experiment cleavable ICAT Mark Flory, Ruedi Aebersold et al. (ISB) MacKay et al. (2004)
PAe000159 TSAAT060c Yeast mzXML_format(1.742 GB)
Search_Results(178.113 MB)

ProteinProphet_file(1.359 MB)

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TSAA time 60 experiment cleavable ICAT Mark Flory, Ruedi Aebersold et al. (ISB) MacKay et al. (2004)
PAe000088 TSAAT090c Yeast mzXML_format(1.661 GB)
RAW_format(1.491 GB)

Search_Results(186.400 MB)

ProteinProphet_file(1.870 MB)

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TSAA time 90 experiment cleavable ICAT Mark Flory, Ruedi Aebersold et al. (ISB) MacKay et al. (2004)
PAe000089 TSAAT120c Yeast mzXML_format(2.163 GB)
RAW_format(1.939 GB)

Search_Results(152.748 MB)

ProteinProphet_file(1.166 MB)

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TSAA time 120 experiment cleavable ICAT Mark Flory, Ruedi Aebersold et al. (ISB) MacKay et al. (2004)
PAe000124 TSAAxT000old Yeast mzXML_format(1.459 GB)
Search_Results(86.171 MB)

ProteinProphet_file(599.590 KB)

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Yeast test experiment. Mark Flory MacKay et al. (2004)
PAe000324 yeast_cell_lysate Yeast mzXML_format(531)
Search_Results(439.256 MB)

ProteinProphet_file(2.329 MB)

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yeast_quality_control Amanda Paulovich Paulovich et al. (2006)
PAe000142 YeastSCXReps Yeast mzXML_format(656.921 MB)
RAW_format(585.633 MB)

Search_Results(75.665 MB)

ProteinProphet_file(385.452 KB)

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Yeast SCX Replicate Runs S. Markey Maynard et al. (2004)
PAe000155 YM_N14N15_DAYGly Yeast mzXML_format(124.223 MB)
Search_Results(26.785 MB)

ProteinProphet_file(361.343 KB)

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6-22-04-YM_N14N15_DAYGly040704_14_45_v0.4 Peng Lu (UT)
PAe000153 YM_N14N15_DAYSer Yeast mzXML_format(124.935 MB)
Search_Results(27.017 MB)

ProteinProphet_file(369.405 KB)

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6-21-04-YM_N14N15_DAYSer040704_14_45_v0.4 Peng Lu (UT)
PAe000143 YM_N14N15_SCYGly Yeast mzXML_format(115.062 MB)
Search_Results(25.680 MB)

ProteinProphet_file(418.389 KB)

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6-23-04_YM_N14N15_SCYGly040704_14_45_v0.4 Peng Lu (UT)
PAe000163 YM_N14N15_SCYSer Yeast mzXML_format(116.657 MB)
Search_Results(26.123 MB)

ProteinProphet_file(352.915 KB)

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6-24-04_YM_N14N15_SCYSer040704_14_45_v0.4 Peng Lu (UT) Prince, J, Carlson, M, Wang, R, Lu, P, and Marcotte E, 2004 Nature Biotechnology, 22(4):471
PAe001466 RatLiver_OGE Rat mzXML_format (2.7GB)
RAW_format (2.7GB)



Pool of rat liver extracts treated with a variety of hepatotoxicants (and vehicle controls); off-gel electrophoresis or strong cation exchange pre-fractionation Ben Collins
PAe001465 MmOsteocyte_MLO-Y4 Mouse mzXML_format (397.3 MB)



MLO-Y4 cells were treated with the Bisphosphonate "Risedronate" at the concentration 10-7M for 1h and 48h. At the end of the treatment protein ext racts were prepared and analysed.The proteome at the basal, untreated condition was used as a reference to whom the proteome from stimulated cells was compared to. Nicoletta Bivi et al.
PAe001454 TAP-PSD95 Mouse RAW_format (7.7 GB)
Targeted Tandem Affinity Purification of PSD-95 recovers core postsic complexes and schizophrenia susceptibility proteins; Esperanza Fernndez et al., MSB, 2009, accepted Esperanza Fernndez, Mark O. Collins et al
PAe001453 Yeast_ETD Yeast mzXML_format (2.6 GB)
RAW_format (5.3 GB)
Decision tree-driven tandem mass spectrometry for shotgun proteomics; Swaney et al., Nat Method 2008 November. 5(11). Danielle L. Swaney, Graeme C. McAlister and Joshua J. Coon Swaney et al. (2008)
PAe000417 mm_liver_organelle-pre5_6 Mouse mzXML_format (251.7 MB)
RAW_format (234.6 MB)
Search_Results (37.4 MB)
ProteinProphet_file (0.1 MB)
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Mouse Liver Organelle pre5_6 DMartin
PAe000381 Placenta_Micro_UT Mouse mzXML_format (958.1 MB)
RAW_format (877.4 MB)
Search_Results (351.5 MB)
ProteinProphet_file (1.2 MB)
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Placenta Microsomal Fraction - UT Andrew Emili
PAe000145 yeast Yeast mzXML_format (651.7 MB)
RAW_format (587.1 MB)
Search_Results (759.6 MB)
ProteinProphet_file (1.9 MB)
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Treatment Description: Iodoacetamide Trypsin Experiment Description: Multidimensional LC MS/MS Steven Gygi et al. (Harvard) Peng et al. (2003)




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