≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS00030
datasetTypeSRM
submitterShizhen Qin <sqin@systemsbiology.org>
submitter_organizationISB
lab_head_full_nameLeroy Hood
lab_head_emailLeroy.Hood@systemsbiology.org
lab_head_organizationISB
lab_head_countryUSA
datasetTagHALT-C_ISB_Michigan
datasetTitleSRM Targeted Proteomics in Search for Biomarkers of HCV-Induced Progression of Fibrosis to Cirrhosis in HALT-C Patients
publicReleaseDate2013-12-30 00:00:00
finalizedDate2012-01-05 13:09:21
summary
contributorsShizhen Qin, Yong Zhou, Li Gray, Min Yuan, Roert L Moritz, Leroy Hood
publicationQin S, Zhou Y, Lok SA, Tsodikov A, Yan XW, Gray Li, Yuan Y, Moritz RL, Galas D, Gilbert S. Omenn1 GS, Hood H, SRM Targeted Proteomics in Search for Biomarkers of HCV-Induced Progression of Fibrosis to Cirrhosis in HALT-C Patients,Proteomics
growth
treatment
extraction
separation
digestion
acquisition
informatics
instrumentsAgilent 6460A QQQ
speciesHuman
massModificationsC+57.021464, variable: K+8.014199, R+10.008269

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00030
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00030
Password: haltc_ISB

Or use your browser's FTP mode: ftp://PASS00030:haltc_ISB@ftp.peptideatlas.org/


Listing of files:

 4.0K Dec 30  2011 HALT-C 30 patients + 17 controls
 4.0K Dec 30  2011 HALT-C 40 patients + 17 controls
  738 Dec 30  2011 PASS00030_DESCRIPTION.txt

Browse FTP upload area