RAW DATA AVAILABLE FOR DOWNLOAD

It is our policy to make publicly available for download as much of the raw data we use to build the PeptideAtlas as possible. This includes datasets that have been previously published or otherwise released by the data producers. If you download and use these data in a published work, please cite the associated article (or data contributors if unpublished); an acknowledgement of the PeptideAtlas repository would also be appreciated. There are also many unpublished raw datasets used to build the PeptideAtlas, and these are not made available for download until publication or release by the producers.

FILTERING THE TABLE

You can use the row above the orange row to filter and limit the data displayed within the table. Just type or select the search terms in the box above each column, and hit enter, the table will be filtered according to all filter terms you entered. Click "reset" on the up right corner of the table to clear all the texts in the first row.

DOWNLOAD INSTRUCTIONS

We have uploaded all the mzXML, RAW, Search_Results and ProteinProphet files to tranche. Please follow the instruction below to download these files.

Download one file: left-click with your mouse, and a TrancheDowloader will pop up. Please follow the steps in the pop up window to download file.
Download multiple files: 1. right-click to select the links you want to download. To deselect the links, right-click the links again. 2. click "Generate Hash File" button, save the page as a text file. if your browser is IE, please open the file you just saved, and save it as ANSI encoding. 3. click "TrancheDownloader" button, go to Preferences > open Preferences, change the dowload location, and then go to Advanced Tools > Download by CSV File. This will download everything in the file.

If you need help, please write to us with our feedback page on the navigation bar.

There are 257 experimental datasets available for download (Wed June 17 12:28:20 PDT 2009)