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RAW DATA AVAILABLE FOR DOWNLOAD

It is our policy to make publicly available for download as much of the raw data we use to build the PeptideAtlas as possible. This includes datasets that have been previously published or otherwise released by the data producers. If you download and use these data in a published work, please cite the associated article (or data contributors if unpublished); an acknowledgement of the PeptideAtlas repository would also be appreciated. There are also many unpublished raw datasets used to build the PeptideAtlas, and these are not made available for download until publication or release by the producers.

If you need help, please write to us with our feedback page on the navigation bar.

There are 174 experimental datasets available for download (Thu May 08 12:25:24 PDT 2008)

Sample Accession	Name	Organism	Resources	Description	Data Contributors	Related Publications
PAe000245	Halo_itraq11	Halobacterium	mzXML_format (2.5 GB) Search_Results (248.6 MB) sequest_params ProteinProphet_file README	Proteins harvested from cultures recovering from gamma irradiation stress and labeled with iTRAQ, multiplex sample #11 with three time points 30, 40, and 60 min during recovery compared against common reference; Whitehead et al., 2006 Mol Syst Biol. 2(47).	Kenia Whitehead and Nitin S Baliga	Whitehead et al. (2006)
PAe000259	Halo_itraq12	Halobacterium	mzXML_format (3.9 GB) Search_Results (2.2 GB) sequest_params ProteinProphet_file README	Proteins harvested from cultures recovering from 0Gy (control) or 2500Gy (experimental) of gamma irradiation stress and labeled with iTRAQ, multiplex sample #12 with three time points 30, 40, 60 min during recovery compared against common reference; Whitehead et al., 2006 Mol Syst Biol. 2(47). Replicate of #11.	Kenia Whitehead and Nitin Baliga	Whitehead et al. (2006)
PAe000244	pum4	Halobacterium	mzXML_format (8.2 MB) Search_Results (2.9 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000219	YAGmem1	Halobacterium	mzXML_format (11.2 MB) Search_Results (2.8 MB) sequest_params ProteinProphet_file README	enrichment for membrane proteins; Goo et al., 2003, Mol Cell Proteomics 2(8):505	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000217	YAGmem1220	Halobacterium	mzXML_format (12.8 MB) Search_Results (4.7 MB) sequest_params ProteinProphet_file README	enrichment for membrane proteins; GPF 1200-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):506	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000248	YAGmem1220_rpt1	Halobacterium	mzXML_format (19.6 MB) Search_Results (2.9 MB) sequest_params ProteinProphet_file README	enrichment for membrane proteins; GPF 1200-2000 m/z; rpt=replicate; Goo et al., 2003, Mol Cell Proteomics 2(8):507	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000251	YAGmem48	Halobacterium	mzXML_format (12.5 MB) Search_Results (7.9 MB) sequest_params ProteinProphet_file README	enrichment for membrane proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):508	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000179	YAGmem812	Halobacterium	mzXML_format (12.2 MB) Search_Results (8.2 MB) sequest_params ProteinProphet_file README	enrichment for membrane proteins; 800-1200 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):509	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000247	yagpm	Halobacterium	mzXML_format (12.9 MB) Search_Results (4.1 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #1, Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000256	yagpm2_1	Halobacterium	mzXML_format (8.1 MB) Search_Results (4.1 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #2 Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000252	yagpm2_2	Halobacterium	mzXML_format (8.5 MB) Search_Results (3.5 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #2 Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000203	yagpm2_3	Halobacterium	mzXML_format (11.6 MB) Search_Results (2.2 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #2 Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000193	yagpm3_1	Halobacterium	mzXML_format (7.9 MB) Search_Results (3.3 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000187	yagpm3_2	Halobacterium	mzXML_format (8.2 MB) Search_Results (2.8 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000189	yagpm3_3	Halobacterium	mzXML_format (11.0 MB) Search_Results (1.7 MB) sequest_params ProteinProphet_file README	enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000240	yagpt	Halobacterium	mzXML_format (12.8 MB) Search_Results (4.6 MB) sequest_params ProteinProphet_file README	enrichment for proteins in precipitant following ultracentrifugation; Goo et al., 2003, Mol Cell Proteomics 2(8):505	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000224	YAGsn1	Halobacterium	mzXML_format (11.1 MB) Search_Results (2.6 MB) sequest_params ProteinProphet_file README	enrichment for soluble proteins; Goo et al., 2003, Mol Cell Proteomics 2(8):505	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000173	yagsn1_1120rpt	Halobacterium	mzXML_format (16.3 MB) Search_Results (4.9 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; 1100-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):506	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000220	yagsn1_48rpt	Halobacterium	mzXML_format (14.2 MB) Search_Results (6.6 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):507	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000210	yagsn1_712rpt	Halobacterium	mzXML_format (14.0 MB) Search_Results (6.5 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; 700-1200 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):508	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000249	yagsn1_YAGsn2	Halobacterium	mzXML_format (11.2 MB) Search_Results (2.7 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; Goo et al., 2003, Mol Cell Proteomics 2(8):509	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000181	yagsn2_1120rpt	Halobacterium	mzXML_format (16.1 MB) Search_Results (5.0 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; 1100-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):510	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000218	YAGsn2_48rpt	Halobacterium	mzXML_format (13.5 MB) Search_Results (6.5 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):511	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000241	yagsn2_712rpt	Halobacterium	mzXML_format (14.1 MB) Search_Results (6.4 MB) sequest_params ProteinProphet_file README	replicate enrichment for soluble proteins; 700-1200 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):512	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000209	YAGwall	Halobacterium	mzXML_format (12.1 MB) Search_Results (2.1 MB) sequest_params ProteinProphet_file README	enrichment for Halobacterium cell wall proteins, Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000254	yagwall_1120rpt	Halobacterium	mzXML_format (22.5 MB) Search_Results (1.8 MB) sequest_params ProteinProphet_file README	enrichment for Halobacterium cell wall proteins; 1100-2000 m/z; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000205	yagwall_48rpt	Halobacterium	mzXML_format (12.7 MB) Search_Results (4.6 MB) sequest_params ProteinProphet_file README	enrichment for Halobacterium cell wall proteins; 400-800m/z; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000225	yagwall_712rpt	Halobacterium	mzXML_format (16.6 MB) Search_Results (3.1 MB) sequest_params ProteinProphet_file README	enrichment for Halobacterium cell wall proteins; 700-1200 m/z; Goo et al., unpublished data.	Y. A. Goo, E. C. Yi, N. S. Baliga, W. A. Tao, M. Pan, R. Aebersold, D. R. Goodlett, L. Hood and W. V. Ng	Goo et al. (2003)
PAe000330	01_glyco	Human	mzXML_format (1.0 GB) RAW_format Search_Results (33.7 MB) ProteinProphet_file README	01_glyco	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000032	031003_BALF2	Human	mzXML_format (238.5 MB) Search_Results (116.2 MB) sequest_params ProteinProphet_file README	Human bronchoalveolar lavage fluid	Samuel Donohoe, Lynn Schnapp (UW/Harborview)	Schnapp et al. (2006)
PAe000033	032403_BALF4_glypep	Human	mzXML_format (72.0 MB) Search_Results (53.2 MB) sequest_params ProteinProphet_file README	Human bronchoalveolar lavage fluid	Samuel Donohoe, Lynn Schnapp (UW/Harborview)	Schnapp et al. (2006)
PAe000034	041803_BALF3	Human	mzXML_format (641.1 MB) Search_Results (108.1 MB) sequest_params ProteinProphet_file README	Human bronchoalveolar lavage fluid	Samuel Donohoe, Lynn Schnapp (UW/Harborview)	Schnapp et al. (2006)
PAe000035	050603_BALF11	Human	mzXML_format (597.2 MB) Search_Results (247.6 MB) sequest_params ProteinProphet_file README	Human bronchoalveolar lavage fluid	Samuel Donohoe, Lynn Schnapp (UW/Harborview)	Schnapp et al. (2006)
PAe000036	051503_BAL20_gly_hui	Human	mzXML_format (21.8 MB) Search_Results (11.7 MB) sequest_params ProteinProphet_file README	Human bronchoalveolar lavage fluid	Samuel Donohoe, Lynn Schnapp (UW/Harborview)	Schnapp et al. (2006)
PAe000037	051503_BAL20_gly_lec	Human	mzXML_format (66.0 MB) Search_Results (27.2 MB) sequest_params ProteinProphet_file README	Human bronchoalveolar lavage fluid	Sam Donohoe, Lynn Schnapp(UW) et al.	Schnapp et al. (2006)
PAe000331	15_clinprot_c3	Human	mzXML_format (454.1 MB) RAW_format Search_Results (22.2 MB) ProteinProphet_file README	15_clinprot_c3	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000338	16_clinprot_c8	Human	mzXML_format (558.5 MB) RAW_format Search_Results (22.9 MB) ProteinProphet_file README	16_clinprot_c8	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000332	17_wcx	Human	mzXML_format (778.2 MB) RAW_format Search_Results (27.9 MB) ProteinProphet_file README	17_wcx	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000335	18_size	Human	mzXML_format (660.4 MB) RAW_format Search_Results (27.9 MB) ProteinProphet_file README	18_size	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000333	19_proteinag	Human	mzXML_format (544.7 MB) RAW_format Search_Results (24.5 MB) ProteinProphet_file README	19_proteinag	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000334	20_cys	Human	mzXML_format (775.7 MB) RAW_format Search_Results (25.9 MB) ProteinProphet_file README	20_cys	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000337	21_unfract	Human	mzXML_format (442.4 MB) RAW_format Search_Results (14.4 MB) ProteinProphet_file README	21_unfract	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000336	22_mars	Human	mzXML_format (656.9 MB) RAW_format Search_Results (36.6 MB) ProteinProphet_file README	22_mars	Amanda Paulovich	Paulavich et al. (2007) J Proteome Res. 2007 Feb;6(2):828-36
PAe000114	A8_IP	Human	mzXML_format (515.9 MB) RAW_format Search_Results (431.1 MB) sequest_params ProteinProphet_file README	Human Erythroleukemia K562 cell line	Katherine Resing (U Col), Meyer-Arendt K, Mendoza AM, Aveline-Wolf LD Jonscher KR, Pierce KG, Old WM, Cheung HT, Russell S, Wattawa JL, Goehle GR, Knight RD, Ahn NG.	Resing et al. 2004, Anal Chem. 2004 Jul 1;76(13):3556-68.
PAe000112	AdducinII	Human	mzXML_format (23.1 MB) Search_Results (22.2 MB) sequest_params ProteinProphet_file README	Purified Human Adducin protein	Dan Martin
PAe000071	b1-CIT_glyco_lcq	Human	mzXML_format (1.2 GB) Search_Results (445.8 MB) sequest_params ProteinProphet_file README	HUPO sample b1-CIT glycopeptide	HUPO Lab 2 is Aebersold Lab, Institute for Systems Biology, Seattle, WA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000072	b1-CIT_glyco_qstar	Human	mzXML_format (11.2 MB) Search_Results (16.9 MB) sequest_params ProteinProphet_file README	HUPO sample b1-CIT glycopeptide	HUPO Lab 2 is Aebersold Lab, Institute for Systems Biology, Seattle, WA	Omenn 2004, Proteomics, V4, I5, 1235-1240 Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000014	Caco2vsEcoli	Human	mzXML_format (552.3 MB) RAW_format Search_Results (336.7 MB) sequest_params ProteinProphet_file README	Human Caco-2 intestinal epithelial cell line; labeled with CL-ICAT; IPI	Sam Donohoe	Hardwidge PR, et al. 2004, J Biol Chem. 279(19):20127-36.
PAe000044	Cytoskeleton	Human	mzXML_format (319.7 MB) Search_Results (214.0 MB) sequest_params ProteinProphet_file README	Human red blood cells	Dan Martin
PAe000314	hair-ucd_hr_cam	Human	mzXML_format (797.7 MB) RAW_format Search_Results (219.6 MB) sequest_params ProteinProphet_file README	Human Hair Sample HR	Y Lee
PAe000311	hair-ucd_jy_cam	Human	mzXML_format (374.5 MB) RAW_format Search_Results (218.4 MB) sequest_params ProteinProphet_file README	Human Hair Sample JY	Y Lee
PAe000315	hair-ucd_sm_cam	Human	mzXML_format (363.3 MB) RAW_format Search_Results (214.9 MB) sequest_params ProteinProphet_file README	Human Hair Sample SM	Y Lee
PAe000021	HFHp100IFN	Human	mzXML_format (291.3 MB) RAW_format Search_Results (79.4 MB) sequest_params ProteinProphet_file README	CL-ICAT, IPI, IFN treatment on liver cells: Membrane fraction (P100) of HFH cells +/- IFN	Wei Yan, Michael G. Katze	Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000022	HFHp3IFN	Human	mzXML_format (308.5 MB) RAW_format Search_Results (73.2 MB) sequest_params ProteinProphet_file README	CL-ICAT, IFN treatment on liver cells: Nuclear fraction (P3) of HFH cells +/- IFN	Wei Yan, Nelson Fausto	Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000023	HFHs100IFN	Human	mzXML_format (2.1 GB) RAW_format Search_Results (988.3 MB) sequest_params ProteinProphet_file README	CL-ICAT, IFN treatment on liver cells: Cytosolic fraction (S100) of Huh7 cells +/- IFN	Wei Yan, Nelson Fausto	Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000276	HsPlasma_tryp_alkylated	Human	mzXML_format (1.3 GB) raw_format Search_Results (1.3 GB) sequest_params ProteinProphet_file README	Qian Plasma alkylated samples	Weijun Qian
PAe000278	HsPlasma_tryp_nonalkylated	Human	mzXML_format (5.9 GB) RAW_format Search_Results (4.8 GB) sequest_params ProteinProphet_file README	Qian Plasma non alkylated samples	Weijun Qian
PAe000011	Huh7-P100_IFN	Human	mzXML_format (656.4 MB) RAW_format Search_Results (311.7 MB) sequest_params ProteinProphet_file README	Interferon (IFN) treatment on liver cells: Membrane fraction (P100) of Huh7 cells +/- IFN. ICAT.	Wei Yan, Michael G. Katze	Yan, W. et al. (2004) Genome Biology 2004, 5:R54 Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000012	Huh7-P3_IFN	Human	mzXML_format (523.7 MB) Search_Results (165.9 MB) sequest_params ProteinProphet_file README	IFN treatment on liver cells: Nuclear fraction (P3) of Huh7 cells +/- IFN	Wei Yan, Michael G. Katze	Yan, W. et al. (2004) Genome Biology 2004, 5:R54 Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000013	Huh7-S100_IFN	Human	mzXML_format (631.6 MB) RAW_format Search_Results (334.9 MB) sequest_params ProteinProphet_file README	IFN treatment on liver cells: Cytosolic fraction (S100) of Huh7 cells +/- IFN	Wei Yan, Michael G. Katze	Yan, W. et al. (2004) Genome Biology 2004, 5:R54 Yan, W. et al. (2004) Mol Cell Proteomics. 2004 Jul 21
PAe000097	HUPO12_run31	Human	mzXML_format (31.0 MB) dtapack_format Search_Results (84.7 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000098	HUPO12_run32	Human	mzXML_format (34.7 MB) dtapack_format Search_Results (80.8 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000099	HUPO12_run33	Human	mzXML_format (43.8 MB) dtapack_format Search_Results (90.3 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000100	HUPO12_run34	Human	mzXML_format (22.4 MB) dtapack_format Search_Results (64.3 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 12 is Hefta, Bristol-Myers Squibb, Pennigton, NJ, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000096	HUPO22_M_CA_S	Human	mzXML_format (2.4 GB) RAW_format Search_Results (608.0 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 22 is Paik, Yonsei Proteome Research Center, Seoul, Korea	Omenn 2004, Proteomics, V4, I5, 1235-1240 Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000058	HUPO28_b1-CIT	Human	mzXML_format (8.1 MB) RAW_format Search_Results (9.8 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000059	HUPO28_b1-SERUM	Human	mzXML_format (8.2 MB) RAW_format Search_Results (10.4 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000060	HUPO28_b2-CIT	Human	mzXML_format (40.9 MB) RAW_format Search_Results (36.7 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000061	HUPO28_b2-SERUM	Human	mzXML_format (41.4 MB) RAW_format Search_Results (37.6 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000062	HUPO28_b3-CIT	Human	mzXML_format (8.3 MB) RAW_format Search_Results (10.3 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000063	HUPO28_b3-SERUM	Human	mzXML_format (8.1 MB) RAW_format Search_Results (10.3 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000064	HUPO28_Ref-CIT	Human	mzXML_format (8.0 MB) RAW_format Search_Results (9.4 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000065	HUPO28_Ref-SERUM	Human	mzXML_format (7.8 MB) RAW_format Search_Results (9.2 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 28 is Pounds/Adkins/Rodland/Anderson, Pacific Northwest Natl Lab, USA	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000066	HUPO29_b1-CIT_1	Human	mzXML_format (278.7 MB) RAW_format Search_Results (506.0 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000067	HUPO29_b1-CIT_win1	Human	mzXML_format (164.2 MB) RAW_format Search_Results (304.2 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000068	HUPO29_b1-CIT_win2	Human	mzXML_format (133.0 MB) RAW_format Search_Results (246.5 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000130	HUPO29_b1-EDTA_1	Human	mzXML_format (365.8 MB) RAW_format Search_Results (509.0 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000131	HUPO29_b1-EDTA_win1	Human	mzXML_format (196.3 MB) RAW_format Search_Results (482.8 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000132	HUPO29_b1-EDTA_win2	Human	mzXML_format (142.2 MB) RAW_format Search_Results (340.1 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000133	HUPO29_b1-HEP	Human	mzXML_format (313.3 MB) RAW_format Search_Results (473.2 MB) sequest_params ProteinProphet_file README	HUPO plasma sample	HUPO Lab 29 is Qian/He, Beijing Institute of Radiation Medicine, Beijing, China	Omenn 2004, Proteomics, V4, I5, 1235-1240
PAe000134	HUPO29_b1-SERUM	Human