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Dataset Identifier

Metadata
datasetIdentifierPASS00048
datasetTypeSRM
submitterAleksey Filimonov <filimonov.a.d@gmail.com>
submitter_organizationIMSB
lab_head_full_nameSergei Moshkovskii
lab_head_emailsergei.moshkovskii@ibmh.msk.ru
lab_head_organizationIMSB
lab_head_countryRussia
datasetTagArt_2012-02-23
datasetTitleDeveloping dMRM for Q6PI98, Q8N2U9, Q96DM3, Q9H3N8
publicReleaseDate2012-04-20 00:00:00
finalizedDate2012-03-20 16:13:39
summaryDeveloping Dynamic MRM Method for Agilent MassHunter for proteins Q6PI98, Q8N2U9, Q96DM3, Q9H3N8 for researching proteome of 18th chromosome. Samples used: normal human plasma and human liver tissue.
contributorsArthur T. Kopylov, Andrey Lisitsa, Sergei Moshkovskii
publicationunpublished
growth
treatment
extraction
separationHuman liver tissue extracted proteins lysis in HFIP 20%; after reduction, alkylation and sigestion with trypsin, final concentration 1 ug/ul, original concentration 12.6 ug/ul.

Normal human plasma lysis in HFIP 20% after immunodepletion on Hu-14 column, reduction, alkylation and digestion with trypsin; the original concentration befor immunodepletion 53.17 mg/ml, after - 24.89 mg/ml (concentrated); in sample - 1 mg/ml.
digestion
acquisition
informatics
instrumentsAgilent Triple Quadrupole LC/MS 6490
speciesHuman
massModificationsC+105.058

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00048
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00048
Password: PP3873wi

Or use your browser's FTP mode: ftp://PASS00048:PP3873wi@ftp.peptideatlas.org/


Listing of files:

 1.1K Mar 20  2012 PASS00048_DESCRIPTION.txt
   50 Mar 20  2012 mrm_Q6PI98P1_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P1_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P1_HLV-r002.d
   68 Mar 20  2012 mrm_Q6PI98P1_HPL-r001.d
   68 Mar 20  2012 mrm_Q6PI98P1_HPL-r002.d
   50 Mar 20  2012 mrm_Q6PI98P2_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P2_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P2_HLV-r002.d
   68 Mar 20  2012 mrm_Q6PI98P2_HPL-r001.d
   68 Mar 20  2012 mrm_Q6PI98P2_HPL-r002.d
   50 Mar 20  2012 mrm_Q6PI98P3A_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P3A_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P3A_HLV-r002.d
   50 Mar 20  2012 mrm_Q6PI98P3A_HPL-r001.d
   50 Mar 20  2012 mrm_Q6PI98P3A_HPL-r002.d
   50 Mar 20  2012 mrm_Q6PI98P3_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P3_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P3_HLV-r002.d
   68 Mar 20  2012 mrm_Q6PI98P3_HPL-r001.d
   68 Mar 20  2012 mrm_Q6PI98P3_HPL-r002.d
   50 Mar 20  2012 mrm_Q6PI98P4_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P4_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P4_HLV-r002.d
   68 Mar 20  2012 mrm_Q6PI98P4_HPL-r001.d
   68 Mar 20  2012 mrm_Q6PI98P4_HPL-r002.d
   50 Mar 20  2012 mrm_Q6PI98P5A_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P5A_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P5A_HLV-r002.d
   50 Mar 20  2012 mrm_Q6PI98P5A_HPL-r001.d
   50 Mar 20  2012 mrm_Q6PI98P5A_HPL-r002.d
   50 Mar 20  2012 mrm_Q6PI98P5_BLK.d
   50 Mar 20  2012 mrm_Q6PI98P5_HLV-r001.d
   50 Mar 20  2012 mrm_Q6PI98P5_HLV-r002.d
   50 Mar 20  2012 mrm_Q6PI98P5_HPL-r001.d
   50 Mar 20  2012 mrm_Q6PI98P5_HPL-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P1_BLK.d
   50 Mar 20  2012 mrm_Q8N2U9P1_HLV-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P1_HLV-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P1_HPL-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P1_HPL-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P2A_BLK.d
   50 Mar 20  2012 mrm_Q8N2U9P2A_HLV-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P2A_HLV-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P2A_HPL-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P2A_HPL-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P2_BLK.d
   50 Mar 20  2012 mrm_Q8N2U9P2_HLV-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P2_HLV-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P2_HPL-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P2_HPL-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P3_BLK.d
   50 Mar 20  2012 mrm_Q8N2U9P3_HLV-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P3_HLV-r002.d
   50 Mar 20  2012 mrm_Q8N2U9P3_HPL-r001.d
   50 Mar 20  2012 mrm_Q8N2U9P3_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P1_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P1_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P1_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P1_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P1_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P2_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P2_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P2_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P2_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P2_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P3A_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P3A_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P3A_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P3A_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P3A_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P3_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P3_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P3_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P3_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P3_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P4_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P4_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P4_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P4_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P4_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P5_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P5_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P5_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P5_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P5_HPL-r002.d
   50 Mar 20  2012 mrm_Q96DM3P6_BLK.d
   50 Mar 20  2012 mrm_Q96DM3P6_HLV-r001.d
   50 Mar 20  2012 mrm_Q96DM3P6_HLV-r002.d
   50 Mar 20  2012 mrm_Q96DM3P6_HPL-r001.d
   50 Mar 20  2012 mrm_Q96DM3P6_HPL-r002.d
   50 Mar 20  2012 mrm_Q9H3N8P1_BLK.d
   50 Mar 20  2012 mrm_Q9H3N8P1_HLV-r001.d
   50 Mar 20  2012 mrm_Q9H3N8P1_HLV-r002.d
   50 Mar 20  2012 mrm_Q9H3N8P1_HPL-r001.d
   50 Mar 20  2012 mrm_Q9H3N8P1_HPL-r002.d
   68 Mar 20  2012 mrm_Q9H3N8P2_BLK.d
   68 Mar 20  2012 mrm_Q9H3N8P2_HLV-r001.d
   68 Mar 20  2012 mrm_Q9H3N8P2_HLV-r002.d
   68 Mar 20  2012 mrm_Q9H3N8P2_HPL-r001.d
   68 Mar 20  2012 mrm_Q9H3N8P2_HPL-r002.d
   68 Mar 20  2012 mrm_Q9H3N8P3_BLK.d
   68 Mar 20  2012 mrm_Q9H3N8P3_HLV-r001.d
   68 Mar 20  2012 mrm_Q9H3N8P3_HLV-r002.d
   68 Mar 20  2012 mrm_Q9H3N8P3_HPL-r001.d
   68 Mar 20  2012 mrm_Q9H3N8P3_HPL-r002.d
   50 Mar 20  2012 mrm_Q9H3N8P4A_BLK.d
   50 Mar 20  2012 mrm_Q9H3N8P4A_HLV-r001.d
   50 Mar 20  2012 mrm_Q9H3N8P4A_HLV-r002.d
   50 Mar 20  2012 mrm_Q9H3N8P4A_HPL-r001.d
   50 Mar 20  2012 mrm_Q9H3N8P4A_HPL-r002.d
   68 Mar 20  2012 mrm_Q9H3N8P4_BLK.d
   68 Mar 20  2012 mrm_Q9H3N8P4_HLV-r001.d
   68 Mar 20  2012 mrm_Q9H3N8P4_HLV-r002.d
   68 Mar 20  2012 mrm_Q9H3N8P4_HPL-r001.d
   68 Mar 20  2012 mrm_Q9H3N8P4_HPL-r002.d
   50 Mar 20  2012 mrm_Q9H3N8P5_BLK.d
   50 Mar 20  2012 mrm_Q9H3N8P5_HLV-r001.d
   50 Mar 20  2012 mrm_Q9H3N8P5_HLV-r002.d
   50 Mar 20  2012 mrm_Q9H3N8P5_HPL-r001.d
   50 Mar 20  2012 mrm_Q9H3N8P5_HPL-r002.d
  85K Mar 20  2012 transition_list.xlsx

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