≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS00274
datasetTypeSRM
submitterNicole Plohnke <Nicole.Plohnke@rub.de>
submitter_organization
lab_head_full_nameSascha Rexroth
lab_head_emailSascha.Rexroth@ruhr-uni-bochum.de
lab_head_organizationRuhr University Bochum
lab_head_countryGermany
datasetTagNP01SRM
datasetTitleSRM-analysis of Podospora anserina mitochondria
publicReleaseDate2014-03-15 00:00:00
finalizedDate2014-03-05 02:53:28
summaryHere we report data of an analysis to monitor the age-related quantitative protein composition of the mitochondria of the fungal aging model Podospora anserina. For a more detailed analysis, a targeted proteome analysis was applied focusing on 15 proteins from respiratory, ROS-scavenging and quality control pathways. Analyzing six distinct age-stages from juvenile to senescent P. anserina cultures revealed low, but statistically significant changes for the mitochondrial respiratory complexes.


A P. anserina PaSod3 over-expression mutant with a phenotype of mitochondrial ROS over-production was used for biological evaluation of changes observed during aging. LC-MS analysis of the mutant revealed severe changes to the mitochondrial proteome – substantially larger than observed during senescence. The vast difference between aging in the wild type and ROS stress in the mutant suggest that oxidative stress within the mitochondria is not the dominating mechanism for the aging process in P. anserina.


contributorsPlohnke, Nicole



Rexroth, Sascha
publicationPlohnke, N, Hamann, A, Poetsch, A, Osiewacz, HD, Rögner M and Rexroth S, Proteomic analysis of mitochondria from senescent Podospora anserina casts new light on ROS dependent aging mechanisms, Experimental Gerontology, in Press
growth
treatment
extraction
separation
digestion
acquisition
informatics
instrumentsThermo Scientific TSQ Vantage
speciesPodospora anserina
massModificationsK+8.014199, R+10.008269

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00274
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00274
Password: WR674fak

Or use your browser's FTP mode: ftp://PASS00274:WR674fak@ftp.peptideatlas.org/


Listing of files:

  400 Jul 22  2013 PASS00274_DESCRIPTION-2013-06-22_055555.txt
 1.4K Jul 23  2013 PASS00274_DESCRIPTION-2013-06-23_013052.txt
 1.4K Dec  5  2013 PASS00274_DESCRIPTION-2013-11-05_062756.txt
 1.8K Mar  5  2014 PASS00274_DESCRIPTION.txt
 4.0K Jul 23  2013 raw-data
  21K Jul 29  2013 transition_list_P.anserina_WT_new.xlsx
  36K Jul 23  2013 transition_list_P.anserina_mutant.xlsx

Browse FTP upload area