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Dataset Identifier

Metadata
datasetIdentifierPASS00335
datasetTypeSRM
submitterEustache Paramithiotis <eparamithiotis@caprion.com>
submitter_organization
lab_head_full_nameEustache Paramithiotis
lab_head_emaileparamithiotis@caprion.com
lab_head_organizationCaprion.com
lab_head_countryCanada
datasetTagQualifTbSA
datasetTitleMRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (South Africa center)
publicReleaseDate2014-03-01 00:00:00
finalizedDate2013-10-07 11:55:46
summaryThe overall goal of the project is to identify candidate biomarkers of Active infection with Mycobacterium tuberculosis (Mtb) in individuals with or without HIV. Samples were analyzed from two tuberculosis (TB) endemic countries, Brazil and South Africa (SA), as well as from the United States (US). The US site included patients that were in the early stages of Active TB, with mean symptom duration of 1.5 months. The subjects from the Brazil site had mean symptom duration of 6 months, and the SA site subjects had advanced TB. All sites also provided samples asymptomatic for TB or with Latent TB infection. The US and SA sites also had subjects with and without HIV co-infection, whereas the Brazilian subjects were all HIV-. This specific dataset corresponds to the Qualification step of the study, for the South Africa center.
contributorsEustache Paramithiotis
publicationUnpublished
growth
treatment
extraction
separation
digestionTrypsin
acquisition
informatics
instrumentsAB Sciex QTRAP 5500
speciesHuman
massModificationsNone

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00335
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00335
Password: XV7254zo

Or use your browser's FTP mode: ftp://PASS00335:XV7254zo@ftp.peptideatlas.org/


Listing of files:

 1.5M Oct  7  2013 DataMZAM27F11101.wiff
 721K Oct  7  2013 DataMZAM27F11101.wiff.scan
  37M Oct  7  2013 DataMZAM28F11101.wiff
  18M Oct  7  2013 DataMZAM28F11101.wiff.scan
  70M Oct  7  2013 DataMZAM29F11101.wiff
  36M Oct  7  2013 DataMZAM29F11101.wiff.scan
 1.3K Oct  7  2013 PASS00335_DESCRIPTION.txt
  52K Oct  7  2013 Q-ZAM_TransitionMAP_PASSEL.tsv

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