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Dataset Identifier

Metadata
datasetIdentifierPASS00343
datasetTypeSRM
submitterEustache Paramithiotis <eparamithiotis@caprion.com>
submitter_organization
lab_head_full_nameEustache Paramithiotis
lab_head_emaileparamithiotis@caprion.com
lab_head_organizationCaprion.com
lab_head_countryCanada
datasetTagQualifTbProg
datasetTitleMRM qualification of plasma/serum protein biomarkers for progression from Mycobacterium tuberculosis infection to disease
publicReleaseDate2014-03-01 00:00:00
finalizedDate2013-10-21 07:17:37
summaryThe overall scope of this study is to find early tuberculosis (TB) candidate protein biomarkers in different TB study groups vs. controls. The identified biomarkers may become the basis of a rapid diagnostic test able to identify active TB earlier than current practice. In addition, the candidate biomarkers may predict which patients are likely to convert from latent infection to active disease. . This project uses plasma and serum samples collected in a long-standing TB household contact study, the Kawempe Community Health Study, conducted in Kampala, Uganda, a TB endemic area. The study utilizes samples from TB index cases and household contacts that were negative for TB at recruitment. A subset of these contacts developed Mtb infection (i.e., their Tuberculin Skin Test (TST) converted to positive) after 3-6 months, and smaller subset developed active TB after 3 months of follow-up. Control patients were still TST negative at 12 months or 24 months of follow-up. This dataset corresponds to the qualification phase of the study.
contributorsEustache Paramithiotis
publicationUnpublished
growth
treatment
extraction
separation
digestionTrypsin
acquisition
informatics
instrumentsAB Sciex QTRAP 5500
speciesHuman
massModificationsNone

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00343
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00343
Password: VX2554t

Or use your browser's FTP mode: ftp://PASS00343:VX2554t@ftp.peptideatlas.org/


Listing of files:

 4.2M Oct 21  2013 DataPZHH01E13101.wiff
 3.2M Oct 21  2013 DataPZHH01E13101.wiff.scan
  80M Oct 21  2013 DataPZHH01E13102.wiff
  67M Oct 21  2013 DataPZHH01E13102.wiff.scan
 1.2M Oct 21  2013 DataPZHH25D13101.wiff
 767K Oct 21  2013 DataPZHH25D13101.wiff.scan
 1.5K Oct 21  2013 PASS00343_DESCRIPTION.txt
  94K Oct 21  2013 ZHH_TransitionMAP.txt

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