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Dataset Identifier
Metadata
datasetIdentifierPASS00678
datasetTypeSRM
submitterGuadalupe Espadas <guadalupe.espadas@crg.eu>
submitter_organizationProteomics Unit, Center of Genomics Regulation (CRG), 08003 Barcelona, Spain; Proteomics Unit, Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain
lab_head_full_nameEduard Sabidó
lab_head_emaileduard.sabido@crg.eu
lab_head_organizationProteomics Unit, Center of Genomics Regulation (CRG), 08003 Barcelona, Spain; Proteomics Unit, Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain
lab_head_countrySpain
datasetTagCisHomeostasisHuman
datasetTitleIdentification of cis-regulatory variation of transcripts and proteins involved in trace element homeostasis in humans.
publicReleaseDate2015-12-31 00:00:00
finalizedDate2015-04-28 02:45:54
summary
contributorsJohannes Engelken, Guadalupe Espadas, Francesco Mancuso, Nuria Bonet, Anna-Lena Scherr, Victoria Jímenez1, Marta Codina, Daniel Medina1, Nino Spataro1, Mark Stoneking, Francesc Calafell1, Eduard Sabidó, Elena Bosch
publicationunpublished
growth
treatment
extraction
separation
digestion
acquisition
informatics
instruments5500 Q-Trap (AB Sciex, Framingham, MA, USA)
speciesHuman
massModificationsOxidation of methionine and protein acetylation at the N-terminal were defined as variable modification, whereas carbamidomethylation on cysteines, and 13C6,15N2-Lysine and 13C6,15N4-Arginine were set as fix modifications.
Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00678
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00678
Password: JZ8367wtj

Or use your browser's FTP mode: ftp://PASS00678:JZ8367wtj@ftp.peptideatlas.org/

Listing of files:

 1.3M Apr 28  2015 130402_S_JJEB_01_01_Sample_100.wiff
 430K Apr 28  2015 130402_S_JJEB_01_01_Sample_100.wiff.scan
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 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_116.wiff
 432K Apr 28  2015 130402_S_JJEB_01_17_Sample_116.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_123.wiff
 432K Apr 28  2015 130402_S_JJEB_01_17_Sample_123.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_149.wiff
 429K Apr 28  2015 130402_S_JJEB_01_17_Sample_149.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_156.wiff
 431K Apr 28  2015 130402_S_JJEB_01_17_Sample_156.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_18.wiff
 434K Apr 28  2015 130402_S_JJEB_01_17_Sample_18.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_43.wiff
 431K Apr 28  2015 130402_S_JJEB_01_17_Sample_43.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_68.wiff
 433K Apr 28  2015 130402_S_JJEB_01_17_Sample_68.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_85.wiff
 428K Apr 28  2015 130402_S_JJEB_01_17_Sample_85.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_92.wiff
 432K Apr 28  2015 130402_S_JJEB_01_17_Sample_92.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_17_Sample_99.wiff
 430K Apr 28  2015 130402_S_JJEB_01_17_Sample_99.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_18_Sample_19.wiff
 433K Apr 28  2015 130402_S_JJEB_01_18_Sample_19.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_18_Sample_44.wiff
 430K Apr 28  2015 130402_S_JJEB_01_18_Sample_44.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_19_Sample_20.wiff
 431K Apr 28  2015 130402_S_JJEB_01_19_Sample_20.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_19_Sample_45.wiff
 431K Apr 28  2015 130402_S_JJEB_01_19_Sample_45.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_20_Sample_21.wiff
 434K Apr 28  2015 130402_S_JJEB_01_20_Sample_21.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_20_Sample_46.wiff
 428K Apr 28  2015 130402_S_JJEB_01_20_Sample_46.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_21_Sample_22.wiff
 433K Apr 28  2015 130402_S_JJEB_01_21_Sample_22.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_21_Sample_48.wiff
 429K Apr 28  2015 130402_S_JJEB_01_21_Sample_48.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_22_Sample_23.wiff
 432K Apr 28  2015 130402_S_JJEB_01_22_Sample_23.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_22_Sample_49.wiff
 429K Apr 28  2015 130402_S_JJEB_01_22_Sample_49.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_23_Sample_24.wiff
 432K Apr 28  2015 130402_S_JJEB_01_23_Sample_24.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_23_Sample_50.wiff
 430K Apr 28  2015 130402_S_JJEB_01_23_Sample_50.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_24_Sample_25.wiff
 432K Apr 28  2015 130402_S_JJEB_01_24_Sample_25.wiff.scan
 1.3M Apr 28  2015 130402_S_JJEB_01_24_Sample_51.wiff
 429K Apr 28  2015 130402_S_JJEB_01_24_Sample_51.wiff.scan
  867 Apr 28  2015 PASS00678_DESCRIPTION.txt
  26K Apr 28  2015 PASS00678_transitions_input.txt

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