≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS00188
datasetTypeSRM
submitterAlessandro Ori <alessandro.ori@embl.de>
submitter_organizationEMBL Heidelberg
lab_head_full_nameMartin Beck
lab_head_emailmartin.beck@embl.de
lab_head_organizationEMBL Heidelberg
lab_head_countryGermany
datasetTagNPC-cell-types
datasetTitleQuantification of human nuclear pore complex composition in five cell lines (HeLa, HEK293, RKO, K562, SK-MEL-5)
publicReleaseDate2013-03-01 00:00:00
finalizedDate2013-01-22 00:20:34
summary
contributorsAlessandro Ori, Niccolò Banterle, Murat Iskar, Amparo Andrés-Pons, Claudia Escher, Huy Khanh Bui, Lenore Sparks, Victor Solis-Mezarino, Oliver Rinner, Peer Bork, Edward A Lemke and Martin Beck

publicationOri A, Banterle N, Iskar M, Andrés-Pons A, Escher C, Bui HK, Sparks L, Solis-Mezarino V, Rinner O, Bork P, Lemke EA and Beck M, Cell type-specific nuclear pores: A case in point for context-dependent stoichiometry of molecular machines, Molecular Systems Biology, submitted
growth
treatmentNuclei isolation
extraction
separation
digestion
acquisition
informaticsmProphet
instrumentsThermo Scientific TSQ Vantage
speciesHuman
massModificationsstatic: C+57.021464, variable: K+8.014199, R+10.008269

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS00188
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS00188
Password: an0606na

Or use your browser's FTP mode: ftp://PASS00188:an0606na@ftp.peptideatlas.org/


Listing of files:

 7.2M Jan 21  2013 NhekR1_P1.mzXML
 123K Jan 21  2013 NhekR1_P1_scores.xls
 7.1M Jan 21  2013 NhekR1_P2.mzXML
 123K Jan 21  2013 NhekR1_P2_scores.xls
 6.9M Jan 21  2013 NhekR1_P3.mzXML
 127K Jan 21  2013 NhekR1_P3_scores.xls
 6.9M Jan 21  2013 NhekR1_P4.mzXML
 124K Jan 21  2013 NhekR1_P4_scores.xls
 7.2M Jan 21  2013 NhekR2_P1.mzXML
 124K Jan 21  2013 NhekR2_P1_scores.xls
 7.1M Jan 21  2013 NhekR2_P2.mzXML
 125K Jan 21  2013 NhekR2_P2_scores.xls
 6.9M Jan 21  2013 NhekR2_P3.mzXML
 126K Jan 21  2013 NhekR2_P3_scores.xls
 6.9M Jan 21  2013 NhekR2_P4.mzXML
 125K Jan 21  2013 NhekR2_P4_scores.xls
 7.2M Jan 21  2013 NhekR3_P1.mzXML
 125K Jan 21  2013 NhekR3_P1_scores.xls
 7.1M Jan 21  2013 NhekR3_P2.mzXML
 127K Jan 21  2013 NhekR3_P2_scores.xls
 6.9M Jan 21  2013 NhekR3_P3.mzXML
 124K Jan 21  2013 NhekR3_P3_scores.xls
 6.9M Jan 21  2013 NhekR3_P4.mzXML
 124K Jan 21  2013 NhekR3_P4_scores.xls
 7.2M Jan 21  2013 NhelaR1_P1.mzXML
 125K Jan 21  2013 NhelaR1_P1_scores.xls
 7.1M Jan 21  2013 NhelaR1_P2.mzXML
 125K Jan 21  2013 NhelaR1_P2_scores.xls
 6.9M Jan 21  2013 NhelaR1_P3.mzXML
 124K Jan 21  2013 NhelaR1_P3_scores.xls
 6.9M Jan 21  2013 NhelaR1_P4.mzXML
 124K Jan 21  2013 NhelaR1_P4_scores.xls
 7.2M Jan 21  2013 NhelaR2_P1.mzXML
 123K Jan 21  2013 NhelaR2_P1_scores.xls
 7.1M Jan 21  2013 NhelaR2_P2.mzXML
 124K Jan 21  2013 NhelaR2_P2_scores.xls
 6.9M Jan 21  2013 NhelaR2_P3.mzXML
 126K Jan 21  2013 NhelaR2_P3_scores.xls
 6.9M Jan 21  2013 NhelaR2_P4.mzXML
 123K Jan 21  2013 NhelaR2_P4_scores.xls
 7.2M Jan 21  2013 NhelaR3_P1.mzXML
 125K Jan 21  2013 NhelaR3_P1_scores.xls
 7.1M Jan 21  2013 NhelaR3_P2.mzXML
 126K Jan 21  2013 NhelaR3_P2_scores.xls
 6.9M Jan 21  2013 NhelaR3_P3.mzXML
 124K Jan 21  2013 NhelaR3_P3_scores.xls
 6.9M Jan 21  2013 NhelaR3_P4.mzXML
 122K Jan 21  2013 NhelaR3_P4_scores.xls
 7.2M Jan 21  2013 Nk562R1_P1.mzXML
 126K Jan 21  2013 Nk562R1_P1_scores.xls
 7.1M Jan 21  2013 Nk562R1_P2.mzXML
 125K Jan 21  2013 Nk562R1_P2_scores.xls
 6.9M Jan 21  2013 Nk562R1_P3.mzXML
 127K Jan 21  2013 Nk562R1_P3_scores.xls
 6.9M Jan 21  2013 Nk562R1_P4.mzXML
 124K Jan 21  2013 Nk562R1_P4_scores.xls
 7.2M Jan 21  2013 Nk562R2_P1.mzXML
 126K Jan 21  2013 Nk562R2_P1_scores.xls
 7.1M Jan 21  2013 Nk562R2_P2.mzXML
 127K Jan 21  2013 Nk562R2_P2_scores.xls
 6.9M Jan 21  2013 Nk562R2_P3.mzXML
 129K Jan 21  2013 Nk562R2_P3_scores.xls
 6.9M Jan 21  2013 Nk562R2_P4.mzXML
 125K Jan 21  2013 Nk562R2_P4_scores.xls
 7.2M Jan 21  2013 Nk562R3_P1.mzXML
 126K Jan 21  2013 Nk562R3_P1_scores.xls
 7.1M Jan 21  2013 Nk562R3_P2.mzXML
 125K Jan 21  2013 Nk562R3_P2_scores.xls
 6.9M Jan 21  2013 Nk562R3_P3.mzXML
 125K Jan 21  2013 Nk562R3_P3_scores.xls
 6.9M Jan 21  2013 Nk562R3_P4.mzXML
 127K Jan 21  2013 Nk562R3_P4_scores.xls
 7.2M Jan 21  2013 NrkoR1_P1.mzXML
 123K Jan 21  2013 NrkoR1_P1_scores.xls
 7.1M Jan 21  2013 NrkoR1_P2.mzXML
 124K Jan 21  2013 NrkoR1_P2_scores.xls
 6.9M Jan 21  2013 NrkoR1_P3.mzXML
 123K Jan 21  2013 NrkoR1_P3_scores.xls
 6.9M Jan 21  2013 NrkoR1_P4.mzXML
 124K Jan 21  2013 NrkoR1_P4_scores.xls
 7.2M Jan 21  2013 NrkoR2_P1.mzXML
 127K Jan 21  2013 NrkoR2_P1_scores.xls
 7.1M Jan 21  2013 NrkoR2_P2.mzXML
 127K Jan 21  2013 NrkoR2_P2_scores.xls
 6.9M Jan 21  2013 NrkoR2_P3.mzXML
 125K Jan 21  2013 NrkoR2_P3_scores.xls
 6.9M Jan 21  2013 NrkoR2_P4.mzXML
 125K Jan 21  2013 NrkoR2_P4_scores.xls
 7.2M Jan 21  2013 NrkoR3_P1.mzXML
 126K Jan 21  2013 NrkoR3_P1_scores.xls
 7.1M Jan 21  2013 NrkoR3_P2.mzXML
 124K Jan 21  2013 NrkoR3_P2_scores.xls
 6.9M Jan 21  2013 NrkoR3_P3.mzXML
 125K Jan 21  2013 NrkoR3_P3_scores.xls
 6.9M Jan 21  2013 NrkoR3_P4.mzXML
 126K Jan 21  2013 NrkoR3_P4_scores.xls
 7.2M Jan 21  2013 NskmelR1_P1.mzXML
 125K Jan 21  2013 NskmelR1_P1_scores.xls
 7.1M Jan 21  2013 NskmelR1_P2.mzXML
 125K Jan 21  2013 NskmelR1_P2_scores.xls
 6.9M Jan 21  2013 NskmelR1_P3.mzXML
 125K Jan 21  2013 NskmelR1_P3_scores.xls
 6.9M Jan 21  2013 NskmelR1_P4.mzXML
 124K Jan 21  2013 NskmelR1_P4_scores.xls
 7.2M Jan 21  2013 NskmelR2_P1.mzXML
 124K Jan 21  2013 NskmelR2_P1_scores.xls
 7.1M Jan 21  2013 NskmelR2_P2.mzXML
 126K Jan 21  2013 NskmelR2_P2_scores.xls
 6.9M Jan 21  2013 NskmelR2_P3.mzXML
 125K Jan 21  2013 NskmelR2_P3_scores.xls
 6.9M Jan 21  2013 NskmelR2_P4.mzXML
 124K Jan 21  2013 NskmelR2_P4_scores.xls
 7.2M Jan 21  2013 NskmelR3_P1.mzXML
 127K Jan 21  2013 NskmelR3_P1_scores.xls
 7.1M Jan 21  2013 NskmelR3_P2.mzXML
 125K Jan 21  2013 NskmelR3_P2_scores.xls
 6.9M Jan 21  2013 NskmelR3_P3.mzXML
 126K Jan 21  2013 NskmelR3_P3_scores.xls
 6.9M Jan 21  2013 NskmelR3_P4.mzXML
 127K Jan 21  2013 NskmelR3_P4_scores.xls
  913 Jan 21  2013 PASS00188_DESCRIPTION-2013-00-21_082612.txt
  941 Jan 22  2013 PASS00188_DESCRIPTION.txt
 424K Jan 21  2013 transition_list_NPC-cell-types.tsv

Browse FTP upload area