≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Search All Builds Select Build Stats & Lists Peps & Prots for Default Builds Summarize Peptide View Ortholog Group Current Build Peptide Protein Queries Browse Peptides Browse Proteins Browse Core Proteome Browse PTM Summary Browse Protein By Experiment Compare Proteins in 2 Builds Search Proteins Pathways HPP Protein Lists SRMAtlas Query Transitions Transition Lists SRMAtlas Builds PASSEL Experiments PASSEL Data Submission SWATH/DIA Download Library Custom Library Assess Library Upload Library

View Dataset


Email address      Password

Dataset Identifier

Metadata
datasetIdentifierPASS01244
datasetTypeMSMS
submitterJin Zou <jzou@cau.edu>
submitter_organizationClark Atlanta University
lab_head_full_nameDr. Valerie A Odero-Marah
lab_head_emailvoderomarah@cau.edu
lab_head_organizationClark Atlanta University
lab_head_countryUnited States
datasetTagPeroxidasin
datasetTitlePXDN promotes prostate cancer progression
publicReleaseDate2019-08-21 00:00:00
finalizedDate2018-08-22 10:21:06
summary
contributorsJodi Dougan

Ohuod Hawsawi

Liza J Burton

Gabrielle Edwards

Kia Jones

Jin Zou

Peri Nagappan

GuangDi Wang

Qiang Zhang

Alira Danaher

Nathan Bowen

Cimona Hinton

Valerie A Odero-Marah
publicationDougan, J, Hawsawi, O, Burton, LJ, Edwards, G, Jones, K, Zou, J, Nagappan, P, Wang, G, Zhang, Q, Danaher, A, Bowen, N, Hinton, C, and Odero-Marah, VA, Proteomics-Metabolomics Combined Approach Identifies Peroxidasin as a Protector against Metabolic and Oxidative Stress, Journal of Proteomics Research, submitted
growth
treatment
extraction
separation
digestion
acquisition
informatics
instrumentsThermo Scientific LTQ Orbitrap XL
speciesHuman
massModificationsstatic modifications:
carbamidomethylation (+57 Da),
N-terminal TMT 6-plex (+229 Da),
lysylTMT6-plex (+229 Da).

dynamic modifications:
N-terminal Cln-pyro-Glu (+17 Da),
methionine oxidation (+16 Da),
STY phosphorylation (+80 Da).

Official URL for this dataset: http://www.peptideatlas.org/PASS/PASS01244
To access files via FTP, use credentials:
Servername: ftp.peptideatlas.org
Username: PASS01244
Password: KN5843kr

Or use your browser's FTP mode: ftp://PASS01244:KN5843kr@ftp.peptideatlas.org/


Listing of files:

  875 Aug 21  2018 PASS01244_DESCRIPTION-2018-07-21_104304.txt
 1.1K Aug 22  2018 PASS01244_DESCRIPTION.txt
  14K Aug 22  2018 Search Parameter and Reference Search Database.docx
 109M Aug 22  2018 ZJ0430_C4_2_Frct10_Labeled_BG5_Apr30_2015.raw
 105M Aug 22  2018 ZJ0430_C4_2_Frct11_Labeled_BG6_Apr30_2015.raw
  93M Aug 22  2018 ZJ0430_C4_2_Frct12_Labeled_BG7_Apr30_2015.raw
 124M Aug 22  2018 ZJ0430_C4_2_Frct1_Labeled_BF8_Apr30_2015.raw
  99M Aug 22  2018 ZJ0430_C4_2_Frct2_Labeled_BF9_Apr30_2015.raw
  93M Aug 22  2018 ZJ0430_C4_2_Frct3_Labeled_BF10_Apr30_2015.raw
  90M Aug 22  2018 ZJ0430_C4_2_Frct4_Labeled_BF11_Apr30_2015.raw
  93M Aug 22  2018 ZJ0430_C4_2_Frct5_Labeled_BF12_Apr30_2015.raw
 104M Aug 22  2018 ZJ0430_C4_2_Frct6_Labeled_BG1_Apr30_2015.raw
 103M Aug 22  2018 ZJ0430_C4_2_Frct7_Labeled_BG2_Apr30_2015.raw
 106M Aug 22  2018 ZJ0430_C4_2_Frct8_Labeled_BG3_Apr30_2015.raw
 101M Aug 22  2018 ZJ0430_C4_2_Frct9_Labeled_BG4_Apr30_2015.raw
 183M Aug 22  2018 ZJ0430_C4_2_Totl1_Labeled_BF6_Apr30_2015.raw
 196M Aug 22  2018 ZJ0430_C4_2_Totl1_Labeled_BF6_Apr30_2015_a.raw
 196M Aug 22  2018 ZJ0430_C4_2_Totl1_Labeled_BF6_Apr30_2015_b1.raw
 196M Aug 22  2018 ZJ0430_C4_2_Totl2_Labeled_BF7_Apr30_2015_a1.raw
 195M Aug 22  2018 ZJ0430_C4_2_Totl2_Labeled_BF7_Apr30_2015_b1.raw
 200M Aug 22  2018 ZJ0430_C4_2_Totl2_Labeled_BF7_Apr30_2015_b2.raw
 781K Aug 22  2018 ZJ0430_C4_2_Totl2andTotle1andAllFrcts_Labeled_BF7_Apr30_2015_All18runs Jin.xlsx
 847M Aug 22  2018 ZJ0430_C4_2_Totl2andTotle1andAllFrcts_Labeled_BF7_Apr30_2015_All18runs.mzML

Browse FTP upload area