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FAQ: "How should I cite PeptideAtlas?"
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We thank you for citing PeptideAtlas in any publication
that makes use of PeptideAtlas. You can find appropriate
citations on our Publications page.
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FAQ: "How do I search for a peptide sequence?"
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On the left navigation bar, enter the sequence in the
space under "Search Database" and press Enter.
A table will be displayed with one row for each
PeptideAtlas build in which your peptide appears.
If it does not appear in any build, a message to that
effect will appear.
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FAQ: "How can I view the spectra of a peptide sequence?"
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Perform the procedure above. In the resulting table,
click any peptide identifier. You will be taken to a page
with links to all spectra identified to that peptide in
that PeptideAtlas build.
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FAQ: "Where can I download spectra or search results?"
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The spectra and search results are available in the
repository
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FAQ: "What is public about your data?"
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The following sample record fields are made available if you
you have specified minimum public access (private).
1: Institution, Contact, Date
7: Organism NCBI_TaxID (9606 for human)
11: Cell-type
The spectra are not made available for the minimum public access
(private) datasets.
The following sample record fields are made available if you
you have specified full public access.
1: Institution, Contact, Date
2: URL link to www resource
3: Literature PubMed ID
4: Experiment description
5: Treatment Description
6: Instrument type (LCQ, etc.)
7: Organism NCBI_TaxID (9606 for human)
8: Bio source description (eVOC) anatomical site
9: Developmental stage (eVOC)
10: Pathology (eVOC)
11: Cell-type
12: Date that we may make the raw data available to the public
The spectra and data products are made available for the public
access datasets. They are available at
http://www.peptideatlas.org/repository
If you have other questions, please send email.
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