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FAQ: "What is public about your data?"
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The following sample record fields are made available if you
you have specified minimum public access (private).
1: Institution, Contact, Date
7: Organism NCBI_TaxID (9606 for human)
11: Cell-type
The spectra are not made available for the minimum public access
(private) datasets.
The following sample record fields are made available if you
you have specified full public access.
1: Institution, Contact, Date
2: URL link to www resource
3: Literature PubMed ID
4: Experiment description
5: Treatment Description
6: Instrument type (LCQ, etc.)
7: Organism NCBI_TaxID (9606 for human)
8: Bio source description (eVOC) anatomical site
9: Developmental stage (eVOC)
10: Pathology (eVOC)
11: Cell-type
12: Date that we may make the raw data available to the public
The spectra and data products are made available for the public
access datasets. They are available at
http://www.peptideatlas.org/repository
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FAQ: "How do I search for a peptide sequence?"
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On the left navigation bar, please select "Search Database"
On the upper tab menu, please select "Browse Peptides"
Select the "Atlas Build" for your organism
Type your sequence in "Peptide Sequence Constraint" textbox
Scroll down the form and enter other items of interest,
and select display options.
Press the "Query" button
Results are returned below the form (select an export
format if you like)
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FAQ: "How can I view the spectra of a peptide sequence?"
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We will soon provide an interface to search and display
the yeast (Sc) consensus spectrum library from Steve Stein (NIST).
The human consensus spectrum library is in progress, but not
yet complete.
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FAQ: "Where can I download spectra or search results?"
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The spectra and search results are available in the
repository
If you have other questions, please send email.
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