Below are individual Human PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build, nor are all file formats available for every build. A complete description of each of the available download formats is available. Link names encode the PeptideProphet cutoff used when creating that build, for example a link named "P≥0.9" denotes a build in which only peptides where P≥0.9 are included.

Peptide sequences in FASTA format: P ≥ 0.9

Peptide CDS coordinates: P ≥ 0.9

Peptide CDS and chromosomal coordinates: P ≥ 0.9

Database tables exported as an XML file: P ≥0.9

Database tables exported as mysql dump file: P ≥0.9

Peptide sequences in FASTA format: P ≥ 0.9

Peptide CDS coordinates: P ≥ 0.9

Peptide CDS and chromosomal coordinates: P ≥ 0.9

Database tables exported as an XML file: P ≥0.9

Database tables exported as mysql dump file: P ≥0.9

Peptide sequences in FASTA format: P ≥ 0.7, P ≥ 0.9,

Peptide CDS coordinates: P ≥ 0.7, P ≥ 0.9,

Peptide CDS and chromosomal coordinates: P ≥ 0.7, P ≥ 0.9,

Peptide sequences in FASTA format: P ≥ 0.7, P ≥ 0.9, P ≥ 0.95, P ≥ 0.99

Peptide CDS coordinates: P ≥ 0.7, P ≥ 0.9, P ≥ 0.95, P ≥ 0.99

Peptide CDS and chromosomal coordinates: P ≥ 0.7, P ≥ 0.9, P ≥ 0.95, P ≥ 0.99

Peptide sequences in FASTA format: P ≥ 0.7, P ≥ 0.9, P ≥ 0.95, P ≥ 0.99

Peptide CDS coordinates: P ≥ 0.7, P ≥ 0.9, P ≥ 0.95, P ≥ 0.99

Peptide CDS and chromosomal coordinates: P ≥ 0.7, P ≥ 0.9, P ≥ 0.95, P ≥ 0.99